Michael Q. Zhang Vis

*	2009
28	EE	Atsushi Niida, Andrew D. Smith, Seiya Imoto, Hiroyuki Aburatani, Michael Q. Zhang, Tetsu Akiyama: Gene set-based module discovery in the breast cancer transcriptome. BMC Bioinformatics 10: (2009)
27	EE	Michael Q. Zhang, Michael S. Waterman, Xuegong Zhang: The Seventh Asia Pacific Bioinformatics Conference (APBC2009). BMC Bioinformatics 10(S-1): (2009)
	2008
26	EE	Ujjwal Maulik, Anirban Mukhopadhyay, Sanghamitra Bandyopadhyay, Michael Q. Zhang, Xuegong Zhang: Multiobjective fuzzy biclustering in microarray data: Method and a new performance measure. IEEE Congress on Evolutionary Computation 2008: 1536-1543
25	EE	Atsushi Niida, Andrew D. Smith, Seiya Imoto, Shuichi Tsutsumi, Hiroyuki Aburatani, Michael Q. Zhang, Tetsu Akiyama: Integrative bioinformatics analysis of transcriptional regulatory programs in breast cancer cells. BMC Bioinformatics 9: (2008)
24	EE	Andrew D. Smith, Zhenyu Xuan, Michael Q. Zhang: Using quality scores and longer reads improves accuracy of Solexa read mapping. BMC Bioinformatics 9: (2008)
23	EE	Xiaowo Wang, Jin Gu, Michael Q. Zhang, Yanda Li: Identification of phylogenetically conserved microRNA cis-regulatory elements across 12 Drosophila species. Bioinformatics 24(2): 165-171 (2008)
22	EE	Hao Lin, Zefeng Zhang, Michael Q. Zhang, Bin Ma, Ming Li: ZOOM! Zillions of oligos mapped. Bioinformatics 24(21): 2431-2437 (2008)
	2007
21	EE	Michael Q. Zhang: Computational analyses of eukaryotic promoters. BMC Bioinformatics 8(S-6): (2007)
20	EE	Dustin E. Schones, Andrew D. Smith, Michael Q. Zhang: Statistical significance of cis-regulatory modules. BMC Bioinformatics 8: (2007)
19	EE	M. Juanita Martinez, Andrew D. Smith, Bilan Li, Michael Q. Zhang, Kevin S. Harrod: Computational prediction of novel components of lung transcriptional networks. Bioinformatics 23(1): 21-29 (2007)
18	EE	Bo Jiang, Michael Q. Zhang, Xuegong Zhang: OSCAR: One-class SVM for accurate recognition of cis-elements. Bioinformatics 23(21): 2823-2828 (2007)
17	EE	Jing Zhang, Bo Jiang, Ming Li, John Tromp, Xuegong Zhang, Michael Q. Zhang: Computing exact P-values for DNA motifs. Bioinformatics 23(5): 531-537 (2007)
16	EE	Chaolin Zhang, Xuegong Zhang, Michael Q. Zhang, Yanda Li: Neighbor number, valley seeking and clustering. Pattern Recognition Letters 28(2): 173-180 (2007)
	2006
15	EE	Chaolin Zhang, Hai-Ri Li, Jian-Bing Fan, Jessica Wang-Rodriguez, Tracy Downs, Xiang-Dong Fu, Michael Q. Zhang: Profiling alternatively spliced mRNA isoforms for prostate cancer classification. BMC Bioinformatics 7: 202 (2006)
14	EE	Fang Fang, Shicai Fan, Xuegong Zhang, Michael Q. Zhang: Predicting methylation status of CpG islands in the human brain. Bioinformatics 22(18): 2204-2209 (2006)
	2005
13	EE	Andrew D. Smith, Pavel Sumazin, Debopriya Das, Michael Q. Zhang: Mining ChIP-chip data for transcription factor and cofactor binding sites. ISMB (Supplement of Bioinformatics) 2005: 403-412
12	EE	Michael Q. Zhang: Computational Molecular Biology of Genome Expression and Regulation. PReMI 2005: 31-38
11	EE	Pavel Sumazin, Gengxin Chen, Naoya Hata, Andrew D. Smith, Theresa Zhang, Michael Q. Zhang: DWE: Discriminating Word Enumerator. Bioinformatics 21(1): 31-38 (2005)
10	EE	Dustin E. Schones, Pavel Sumazin, Michael Q. Zhang: Similarity of position frequency matrices for transcription factor binding sites. Bioinformatics 21(3): 307-313 (2005)
9	EE	Fang Zhao, Zhenyu Xuan, Lihua Liu, Michael Q. Zhang: TRED: a Transcriptional Regulatory Element Database and a platform for in silico gene regulation studies. Nucleic Acids Research 33(Database-Issue): 103-107 (2005)
	2004
8	EE	Fan Long, Hong Liu, Chang S. Hahn, Pavel Sumazin, Michael Q. Zhang, Asher Zilberstein: Genome-wide prediction and analysis of function-specific transcription factor binding sites. In Silico Biology 4: (2004)
	2003
7		Luca Cartegni, Jinhua Wang, Zhengwei Zhu, Michael Q. Zhang, Adrian R. Krainer: ESEfinder: a web resource to identify exonic splicing enhancers. Nucleic Acids Research 31(13): 3568-3571 (2003)
	2001
6		Theresa Zhang, Michael Q. Zhang: Promoter Extraction from GenBank (PEG): automatic extraction of eukaryotic promoter sequences in large sets of genes. Bioinformatics 17(12): 1232-1233 (2001)
5		Jack E. Tabaska, Ramana V. Davuluri, Michael Q. Zhang: Identifying the 3'-terminal exon in human DNA. Bioinformatics 17(7): 602-607 (2001)
	2000
4		Michael Q. Zhang: Discriminant Analysis and Its Application in DNA Sequence Motif Recognition. Briefings in Bioinformatics 1(4): 331-342 (2000)
	1999
3		J. Zhu, Michael Q. Zhang: SCPD: a promoter database of the yeast Saccharomyces cerevisiae. Bioinformatics 15(7): 607-611 (1999)
2	EE	Michael Q. Zhang: Promoter Analysis of Co-regulated Genes in the Yeast Genome. Computers & Chemistry 23(3-4): 233-250 (1999)
	1993
1		Michael Q. Zhang, T. G. Marr: A weight array method for splicing signal analysis. Computer Applications in the Biosciences 9(5): 499-509 (1993)

Coauthor Index

1	Hiroyuki Aburatani	[25] [28]
2	Tetsu Akiyama	[25] [28]
3	Sanghamitra Bandyopadhyay	[26]
4	Luca Cartegni	[7]
5	Gengxin Chen	[11]
6	Debopriya Das	[13]
7	Ramana V. Davuluri	[5]
8	Tracy Downs	[15]
9	Jian-Bing Fan	[15]
10	Shicai Fan	[14]
11	Fang Fang	[14]
12	Xiang-Dong Fu	[15]
13	Jin Gu	[23]
14	Chang S. Hahn	[8]
15	Kevin S. Harrod	[19]
16	Naoya Hata	[11]
17	Seiya Imoto	[25] [28]
18	Bo Jiang	[17] [18]
19	Adrian R. Krainer	[7]
20	Bilan Li	[19]
21	Hai-Ri Li	[15]
22	Ming Li	[17] [22]
23	Yanda Li	[16] [23]
24	Hao Lin	[22]
25	Hong Liu	[8]
26	Lihua Liu	[9]
27	Fan Long	[8]
28	Bin Ma	[22]
29	T. G. Marr	[1]
30	M. Juanita Martinez	[19]
31	Ujjwal Maulik	[26]
32	Anirban Mukhopadhyay	[26]
33	Atsushi Niida	[25] [28]
34	Dustin E. Schones	[10] [20]
35	Andrew D. Smith	[11] [13] [19] [20] [24] [25] [28]
36	Pavel Sumazin	[8] [10] [11] [13]
37	Jack E. Tabaska	[5]
38	John Tromp	[17]
39	Shuichi Tsutsumi	[25]
40	Jinhua Wang	[7]
41	Xiaowo Wang	[23]
42	Jessica Wang-Rodriguez	[15]
43	Michael S. Waterman	[27]
44	Zhenyu Xuan	[9] [24]
45	Chaolin Zhang	[15] [16]
46	Jing Zhang	[17]
47	Theresa Zhang	[6] [11]
48	Xuegong Zhang	[14] [16] [17] [18] [26] [27]
49	Zefeng Zhang	[22]
50	Fang Zhao	[9]
51	J. Zhu	[3]
52	Zhengwei Zhu	[7]
53	Asher Zilberstein	[8]

Colors in the list of coauthors