| * | 2009 |
|---|
| 26 | EE | Jonathan D. Wren:
A global meta-analysis of microarray expression data to predict unknown gene functions and estimate the literature-data divide.
Bioinformatics 25(13): 1694-1701 (2009) |
| 2008 |
|---|
| 25 | EE | Cory B. Giles,
Jonathan D. Wren:
Large-scale directional relationship extraction and resolution.
BMC Bioinformatics 9(S-9): (2008) |
| 24 | EE | Jonathan D. Wren,
Dawn Wilkins,
James C. Fuscoe,
Susan Bridges,
Stephen Winters-Hilt,
Yuriy Gusev:
Proceedings of the 2008 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) Conference.
BMC Bioinformatics 9(S-9): (2008) |
| 23 | EE | Jonathan D. Wren:
URL decay in MEDLINE - a 4-year follow-up study.
Bioinformatics 24(11): 1381-1385 (2008) |
| 22 | EE | Jonathan D. Wren,
Alex Bateman:
Databases, data tombs and dust in the wind.
Bioinformatics 24(19): 2127-2128 (2008) |
| 21 | EE | Mounir Errami,
Justin M. Hicks,
Wayne G. Fisher,
David Trusty,
Jonathan D. Wren,
Tara C. Long,
Harold R. Garner:
Déjà vu - A study of duplicate citations in Medline.
Bioinformatics 24(2): 243-249 (2008) |
| 2007 |
|---|
| 20 | EE | Dawn Wilkins,
Yuriy Gusev,
Raja Loganantharaj,
Susan Bridges,
Stephen Winters-Hilt,
Jonathan D. Wren:
Proceedings of the Fourth Annual Conference of the MidSouth Computational Biology and Bioinformatics Society.
BMC Bioinformatics 8(S-7): (2007) |
| 19 | EE | Mark F. Burkart,
Jonathan D. Wren,
Jason I. Herschkowitz,
Charles M. Perou,
Harold R. Garner:
Clustering microarray-derived gene lists through implicit literature relationships.
Bioinformatics 23(15): 1995-2003 (2007) |
| 18 | EE | Carolina Perez-Iratxeta,
Miguel A. Andrade-Navarro,
Jonathan D. Wren:
Evolving research trends in bioinformatics.
Briefings in Bioinformatics 8(2): 88-95 (2007) |
| 17 | EE | Mounir Errami,
Jonathan D. Wren,
Justin M. Hicks,
Harold R. Garner:
eTBLAST: a web server to identify expert reviewers, appropriate journals and similar publications.
Nucleic Acids Research 35(Web-Server-Issue): 12-15 (2007) |
| 2006 |
|---|
| 16 | EE | Jonathan D. Wren:
A scalable machine-learning approach to recognize chemical names within large text databases.
BMC Bioinformatics 7(S-2): (2006) |
| 15 | EE | Jonathan D. Wren,
Yuriy Gusev,
Andrey A. Ptitsyn,
Stephen Winters-Hilt:
Proceedings of the Third Annual Conference of the MidSouth Computational Biology and Bioinformatics Society.
BMC Bioinformatics 7(S-2): (2006) |
| 14 | EE | Jonathan D. Wren:
Theory and reality for software patents: good in concept, not so good in practice.
Bioinformatics 22(13): 1543-1545 (2006) |
| 13 | EE | Jonathan D. Wren:
Using fuzzy set theory and scale-free network properties to relate MEDLINE terms.
Soft Comput. 10(4): 374-381 (2006) |
| 2005 |
|---|
| 12 | EE | Zengjun Xu,
Tucker A. Patterson,
Jonathan D. Wren,
Tao Han,
Leming M. Shi,
Helen Duhart,
Syed F. Ali,
William Slikker Jr.:
A microarray study of MPP+-treated PC12 Cells: Mechanisms of toxicity (MOT) analysis using bioinformatics tools.
BMC Bioinformatics 6(S-2): (2005) |
| 11 | EE | Jonathan D. Wren,
David Johnson,
Le Gruenwald:
Automating Genomic Data Mining via a Sequence-based Matrix Format and Associative Rule Set.
BMC Bioinformatics 6(S-2): (2005) |
| 10 | EE | Jonathan D. Wren,
William Slikker Jr.:
Proceedings of the Second Annual Conference of the MidSouth Computational Biology and Bioinformatics Society.
BMC Bioinformatics 6(S-2): (2005) |
| 9 | EE | Jonathan D. Wren,
William H. Hildebrand,
Sreedevi Chandrasekaran,
Ulrich Melcher:
Markov model recognition and classification of DNA/protein sequences within large text databases.
Bioinformatics 21(21): 4046-4053 (2005) |
| 8 | EE | Jonathan D. Wren,
Jeffrey T. Chang,
James Pustejovsky,
Eytan Adar,
Harold R. Garner,
Russ B. Altman:
Biomedical term mapping databases.
Nucleic Acids Research 33(Database-Issue): 289-293 (2005) |
| 2004 |
|---|
| 7 | EE | Jonathan D. Wren:
Extending the mutual information measure to rank inferred literature relationships.
BMC Bioinformatics 5: 145 (2004) |
| 6 | EE | Lisa M. Schilling,
Jonathan D. Wren,
Robert P. Dellavalle:
Letter to the Editor.
Bioinformatics 20(17): 2903-2903 (2004) |
| 5 | EE | Jonathan D. Wren,
Harold R. Garner:
Shared relationship analysis: ranking set cohesion and commonalities within a literature-derived relationship network.
Bioinformatics 20(2): 191-198 (2004) |
| 4 | EE | Jonathan D. Wren,
Raffi Bekeredjian,
Jelena A. Stewart,
Ralph V. Shohet,
Harold R. Garner:
Knowledge discovery by automated identification and ranking of implicit relationships.
Bioinformatics 20(3): 389-398 (2004) |
| 3 | EE | Jonathan D. Wren:
404 not found: the stability and persistence of URLs published in MEDLINE.
Bioinformatics 20(5): 668-672 (2004) |
| 2002 |
|---|
| 2 | | Amit V. Kulkarni,
Noelle Sevilir Williams,
Yun Lian,
Jonathan D. Wren,
David Mittelman,
Alexander Pertsemlidis,
Harold R. Garner:
ARROGANT: an application to manipulate large gene collections.
Bioinformatics 18(11): 1410-1417 (2002) |
| 1 | EE | Jonathan D. Wren,
David A. Mittelman,
Harold R. Garner:
SIGNAL-Sequence Information and GeNomic AnaLysis.
Computer Methods and Programs in Biomedicine 68(2): 177-181 (2002) |
