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Shoshana J. Wodak Vis

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*2009
19EEJames Vlasblom, Shoshana J. Wodak: Markov clustering versus affinity propagation for the partitioning of protein interaction graphs. BMC Bioinformatics 10: (2009)
2008
18EEShuye Pu, Karen Ronen, James Vlasblom, Jack Greenblatt, Shoshana J. Wodak: Local coherence in genetic interaction patterns reveals prevalent functional versatility. Bioinformatics 24(20): 2376-2383 (2008)
17EEBenoit H. Dessailly, Marc F. Lensink, Christine A. Orengo, Shoshana J. Wodak: LigASite - a database of biologically relevant binding sites in proteins with known apo-structures. Nucleic Acids Research 36(Database-Issue): 667-673 (2008)
2007
16EEGuillaume Launay, Raul Mendez, Shoshana J. Wodak, Thomas Simonson: Recognizing protein-protein interfaces with empirical potentials and reduced amino acid alphabets. BMC Bioinformatics 8: (2007)
15EEBenoit H. Dessailly, Marc F. Lensink, Shoshana J. Wodak: Relating destabilizing regions to known functional sites in proteins. BMC Bioinformatics 8: (2007)
2006
14EEJames Vlasblom, Samuel Wu, Shuye Pu, Mark Superina, Gina Liu, Chris Orsi, Shoshana J. Wodak: GenePro: a cytoscape plug-in for advanced visualization and analysis of interaction networks. Bioinformatics 22(17): 2178-2179 (2006)
2005
13EEUlrich Güldener, Martin Münsterkötter, Gabi Kastenmüller, Normann Strack, Jacques van Helden, Christian Lemer, J. Richelles, Shoshana J. Wodak, J. García-Martínez, J. E. Pérez-Ortín, Holger Michael, Andreas Kaps, E. Talla, Bernard Dujon, Bruno André, J. L. Souciet, J. De Montigny, E. Bon, C. Gaillardin, Hans-Werner Mewes: CYGD: the Comprehensive Yeast Genome Database. Nucleic Acids Research 33(Database-Issue): 364-368 (2005)
12EEDidier Croes, Fabian Couche, Shoshana J. Wodak, Jacques van Helden: Metabolic PathFinding: inferring relevant pathways in biochemical networks. Nucleic Acids Research 33(Web-Server-Issue): 326-330 (2005)
2004
11EEN. Simonis, Shoshana J. Wodak, G. N. Cohen, Jacques van Helden: Combining pattern discovery and discriminant analysis to predict gene co-regulation. Bioinformatics 20(15): 2370-2379 (2004)
10 Christian Lemer, Erick Antezana, Fabian Couche, Frédéric Fays, Xavier Santolaria, Rekin's Janky, Yves Deville, Jean Richelle, Shoshana J. Wodak: The aMAZE LightBench: a web interface to a relational database of cellular processes. Nucleic Acids Research 32(Database-Issue): 443-448 (2004)
9 Raphaël Leplae, Aline Hebrant, Shoshana J. Wodak, Ariane Toussaint: ACLAME: A CLAssification of Mobile genetic Elements. Nucleic Acids Research 32(Database-Issue): 45-49 (2004)
2003
8EEYves Deville, David Gilbert, Jacques van Helden, Shoshana J. Wodak: An Overview of Data Models for the Analysis of Biochemical Pathways. CMSB 2003: 174
7 Yves Deville, David Gilbert, Jacques van Helden, Shoshana J. Wodak: An overview of data models for the analysis of biochemical pathways. Briefings in Bioinformatics 4(3): 246-259 (2003)
2002
6 Maria Elena Ochagavia, Jean Richelle, Shoshana J. Wodak: Advanced pairwise structure alignments of proteins and analysis of conformational changes. Bioinformatics 18(4): 637-640 (2002)
2001
5 Jacques van Helden, Avi Naim, Christian Lemer, Renato Mancuso, Matthew Eldridge, Shoshana J. Wodak: From Molecular Activities and Processes to Biological Function. Briefings in Bioinformatics 2(1): 81-107 (2001)
2000
4EEJacques van Helden, David Gilbert, Lorenz Wernisch, Michael Schroeder, Shoshana J. Wodak: Application of Regulatory Sequence Analysis and Metabolic Network Analysis to the Interpretation of Gene Expression Data. JOBIM 2000: 147-164
1999
3 Jacques van Helden, David Gilbert, Lorenz Wernisch, Renato Mancuso, Matthew Eldridge, Kirill Degtyarenko, Shoshana J. Wodak: Logical Tools for Quering and Assisting Annotation of a Biochemical Pathway Database. German Conference on Bioinformatics 1999: 227-229
1997
2 Shoshana J. Wodak: Molecular Systematics in Three Dimensions. German Conference on Bioinformatics 1997: 21
1995
1 Christopher J. Rawlings, Dominic A. Clark, Russ B. Altman, Lawrence Hunter, Thomas Lengauer, Shoshana J. Wodak: Proceedings of the Third International Conference on Intelligent Systems for Molecular Biology, Cambridge, United Kingdom, July 16-19, 1995 AAAI 1995

Coauthor Index

1Russ B. Altman [1]
2Bruno André [13]
3Erick Antezana [10]
4E. Bon [13]
5Dominic A. Clark [1]
6G. N. Cohen [11]
7Fabian Couche [10] [12]
8Didier Croes [12]
9Kirill Degtyarenko [3]
10Benoit H. Dessailly [15] [17]
11Yves Deville [7] [8] [10]
12Bernard Dujon [13]
13Matthew Eldridge [3] [5]
14Frédéric Fays [10]
15C. Gaillardin [13]
16J. García-Martínez [13]
17David Gilbert (David R. Gilbert) [3] [4] [7] [8]
18Jack Greenblatt [18]
19Ulrich Güldener [13]
20Aline Hebrant [9]
21Jacques van Helden [3] [4] [5] [7] [8] [11] [12] [13]
22Lawrence Hunter [1]
23Rekin's Janky [10]
24Andreas Kaps [13]
25Gabi Kastenmüller [13]
26Guillaume Launay [16]
27Christian Lemer [5] [10] [13]
28Thomas Lengauer [1]
29Marc F. Lensink [15] [17]
30Raphaël Leplae [9]
31Gina Liu [14]
32Renato Mancuso [3] [5]
33Raul Mendez [16]
34Hans-Werner Mewes [13]
35Holger Michael [13]
36J. De Montigny [13]
37Martin Münsterkötter [13]
38Avi Naim [5]
39Maria Elena Ochagavia [6]
40Christine A. Orengo [17]
41Chris Orsi [14]
42J. E. Pérez-Ortín [13]
43Shuye Pu [14] [18]
44Christopher J. Rawlings [1]
45Jean Richelle [6] [10]
46J. Richelles [13]
47Karen Ronen [18]
48Xavier Santolaria [10]
49Michael Schroeder [4]
50N. Simonis [11]
51Thomas Simonson [16]
52J. L. Souciet [13]
53Normann Strack [13]
54Mark Superina [14]
55E. Talla [13]
56Ariane Toussaint [9]
57James Vlasblom [14] [18] [19]
58Lorenz Wernisch [3] [4]
59Samuel Wu [14]

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Copyright © Tue Nov 3 08:52:44 2009 by Michael Ley (ley@uni-trier.de)