Kimmen Sjölander Vis

*	2009
16	EE	Ron Alterovitz, Aaron Arvey, Sriram Sankararaman, Carolina Dallett, Yoav Freund, Kimmen Sjölander: ResBoost: characterizing and predicting catalytic residues in enzymes. BMC Bioinformatics 10: (2009)
15	EE	Sriram Sankararaman, Bryan Kolaczkowski, Kimmen Sjölander: INTREPID: a web server for prediction of functionally important residues by evolutionary analysis. Nucleic Acids Research 37(Web-Server-Issue): 390-395 (2009)
14	EE	Ruchira S. Datta, Christopher Meacham, Bushra Samad, Christoph Neyer, Kimmen Sjölander: Berkeley PHOG: PhyloFacts orthology group prediction web server. Nucleic Acids Research 37(Web-Server-Issue): 84-89 (2009)
	2008
13	EE	Sriram Sankararaman, Kimmen Sjölander: INTREPID - INformation-theoretic TREe traversal for Protein functional site IDentification. Bioinformatics 24(21): 2445-2452 (2008)
12	EE	Samart Wanchana, Supat Thongjuea, Victor Jun M. Ulat, Mylah Anacleto, Ramil Mauleon, Matthieu Conte, Mathieu Rouard, Manuel Ruiz, Nandini Krishnamurthy, Kimmen Sjölander, Theo van Hintum, Richard M. Bruskiewich: The Generation Challenge Programme comparative plant stress-responsive gene catalogue. Nucleic Acids Research 36(Database-Issue): 943-946 (2008)
	2007
11	EE	Jake Gunn Glanville, Dan Kirshner, Nandini Krishnamurthy, Kimmen Sjölander: Berkeley Phylogenomics Group web servers: resources for structural phylogenomic analysis. Nucleic Acids Research 35(Web-Server-Issue): 27-32 (2007)
	2005
10	EE	Duncan Brown, Nandini Krishnamurthy, Joseph M. Dale, Wayne Christopher, Kimmen Sjölander: Subfamily HMMS in Functional Genomics. Pacific Symposium on Biocomputing 2005
	2004
9	EE	Kimmen Sjölander: Phylogenomic inference of protein molecular function: advances and challenges. Bioinformatics 20(2): 170-179 (2004)
8	EE	Robert C. Edgar, Kimmen Sjölander: A comparison of scoring functions for protein sequence profile alignment. Bioinformatics 20(8): 1301-1308 (2004)
7	EE	Robert C. Edgar, Kimmen Sjölander: COACH: profile-profile alignment of protein families using hidden Markov models. Bioinformatics 20(8): 1309-1318 (2004)
	2003
6	EE	Robert C. Edgar, Kimmen Sjölander: Simultaneous Sequence Alignment and Tree Construction Using Hidden Markov Models. Pacific Symposium on Biocomputing 2003: 180-191
5		Robert C. Edgar, Kimmen Sjölander: SATCHMO: Sequence Alignment and Tree Construction Using Hidden Markov Models. Bioinformatics 19(11): 1404-1411 (2003)
	1998
4		Kimmen Sjölander: Phylogenetic Inference in Protein Superfamilies: Analysis of SH2 Domains. ISMB 1998: 165-174
	1996
3		Kimmen Sjölander, Kevin Karplus, Michael Brown, Richard Hughey, Anders Krogh, I. Saira Mian, David Haussler: Dirichlet mixtures: a method for improved detection of weak but significant protein sequence homology. Computer Applications in the Biosciences 12(4): 327-345 (1996)
	1994
2		Yasubumi Sakakibara, Michael Brown, Richard Hughey, I. Saira Mian, Kimmen Sjölander, Rebecca C. Underwood, David Haussler: Recent Methods for RNA Modeling Using Stochastic Context-Free Grammars. CPM 1994: 289-306
	1993
1		Michael Brown, Richard Hughey, Anders Krogh, I. Saira Mian, Kimmen Sjölander, David Haussler: Using Dirichlet Mixture Priors to Derive Hidden Markov Models for Protein Families. ISMB 1993: 47-55

Coauthor Index

1	Ron Alterovitz	[16]
2	Mylah Anacleto	[12]
3	Aaron Arvey	[16]
4	Duncan Brown	[10]
5	Michael Brown	[1] [2] [3]
6	Richard M. Bruskiewich	[12]
7	Wayne Christopher	[10]
8	Matthieu Conte	[12]
9	Joseph M. Dale	[10]
10	Carolina Dallett	[16]
11	Ruchira S. Datta	[14]
12	Robert C. Edgar	[5] [6] [7] [8]
13	Yoav Freund	[16]
14	Jake Gunn Glanville	[11]
15	David Haussler	[1] [2] [3]
16	Theo van Hintum	[12]
17	Richard Hughey	[1] [2] [3]
18	Kevin Karplus	[3]
19	Dan Kirshner	[11]
20	Bryan Kolaczkowski	[15]
21	Nandini Krishnamurthy	[10] [11] [12]
22	Anders Krogh	[1] [3]
23	Ramil Mauleon	[12]
24	Christopher Meacham	[14]
25	I. Saira Mian	[1] [2] [3]
26	Christoph Neyer	[14]
27	Mathieu Rouard	[12]
28	Manuel Ruiz	[12]
29	Yasubumi Sakakibara	[2]
30	Bushra Samad	[14]
31	Sriram Sankararaman	[13] [15] [16]
32	Supat Thongjuea	[12]
33	Victor Jun M. Ulat	[12]
34	Rebecca C. Underwood	[2]
35	Samart Wanchana	[12]

Colors in the list of coauthors