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Joachim Selbig Vis

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*2009
35EEPawel Durek, Christian Schudoma, Wolfram Weckwerth, Joachim Selbig, Dirk Walther: Detection and characterization of 3D-signature phosphorylation site motifs and their contribution towards improved phosphorylation site prediction in proteins. BMC Bioinformatics 10: (2009)
2008
34EEZoran Nikoloski, Sergio Grimbs, Joachim Selbig, Oliver Ebenhöh: Hardness and Approximability of the Inverse Scope Problem. WABI 2008: 99-112
33EESteve Dworschak, Susanne Grell, Victoria J. Nikiforova, Torsten Schaub, Joachim Selbig: Modeling Biological Networks by Action Languages via Answer Set Programming. Constraints 13(1-2): 21-65 (2008)
32EEJoshua L. Heazlewood, Pawel Durek, Jan Hummel, Joachim Selbig, Wolfram Weckwerth, Dirk Walther, Waltraud X. Schulze: PhosPhAt: a database of phosphorylation sites in Arabidopsis thaliana and a plant-specific phosphorylation site predictor. Nucleic Acids Research 36(Database-Issue): 1015-1021 (2008)
2007
31 Claudia Falter, Alexander Schliep, Joachim Selbig, Martin Vingron, Dirk Walther: Proceedings of the German Conference on Bioinformatics, GCB 2007, September 26-28, 2007, Potsdam, Germany. GI 2007
30EEJan Hummel, Michaela Niemann, Stefanie Wienkoop, Waltraud X. Schulze, Dirk Steinhauser, Joachim Selbig, Dirk Walther, Wolfram Weckwerth: ProMEX: a mass spectral reference database for proteins and protein phosphorylation sites. BMC Bioinformatics 8: (2007)
29EEHenning Redestig, Daniel Weicht, Joachim Selbig, Matthew A. Hannah: Transcription factor target prediction using multiple short expression time series from Arabidopsis thaliana. BMC Bioinformatics 8: (2007)
28EERalf Steuer, Adriano Nunes Nesi, Alisdair R. Fernie, Thilo Gross, Bernd Blasius, Joachim Selbig: From structure to dynamics of metabolic pathways: application to the plant mitochondrial TCA cycle. Bioinformatics 23(11): 1378-1385 (2007)
27EEWolfram Stacklies, Henning Redestig, Matthias Scholz, Dirk Walther, Joachim Selbig: pcaMethods - a bioconductor package providing PCA methods for incomplete data. Bioinformatics 23(9): 1164-1167 (2007)
2006
26EEKirsten Roomp, Niko Beerenwinkel, Tobias Sing, Eugen Schülter, Joachim Büch, Saleta Sierra-Aragon, Martin Däumer, Daniel Hoffmann, Rolf Kaiser, Thomas Lengauer, Joachim Selbig: Arevir: A Secure Platform for Designing Personalized Antiretroviral Therapies Against HIV. DILS 2006: 185-194
25EEHenning Redestig, Florian Sohler, Ralf Zimmer, Joachim Selbig: Unsupervised Decision Trees Structured by Gene Ontology (GO-UDTs) for the Interpretation of Microarray Data. GfKl 2006: 585-592
24EESusanne Grell, Torsten Schaub, Joachim Selbig: Modelling Biological Networks by Action Languages Via Answer Set Programming. ICLP 2006: 285-299
23EEMatthias Steinfath, Dirk Repsilber, Manuela Hische, Nicolas Schauer, Alisdair R. Fernie, Joachim Selbig: Metabolite profiles as a reflection of physiological status -- a methodological validation. J. Integrative Bioinformatics 3(2): (2006)
2005
22EEJan Hummel, Nima Keshvari, Wolfram Weckwerth, Joachim Selbig: Species-specific analysis of protein sequence motifs using mutual information. BMC Bioinformatics 6: 164 (2005)
21EEMatthias Scholz, Fatma Kaplan, Charles L. Guy, Joachim Kopka, Joachim Selbig: Non-linear PCA: a missing data approach. Bioinformatics 21(20): 3887-3895 (2005)
20EENiko Beerenwinkel, Tobias Sing, Thomas Lengauer, Jörg Rahnenführer, Kirsten Roomp, Igor Savenkov, Roman Fischer, Daniel Hoffmann, Joachim Selbig, Klaus Korn, Hauke Walter, Thomas Berg, Patrick Braun, Gerd Fätkenheuer, Mark Oette, Jürgen K. Rockstroh, Bernd Kupfer, Rolf Kaiser, Martin Däumer: Computational methods for the design of effective therapies against drug resistant HIV strains. Bioinformatics 21(21): 3943-3950 (2005)
19EENiko Beerenwinkel, Jörg Rahnenführer, Rolf Kaiser, Daniel Hoffmann, Joachim Selbig, Thomas Lengauer: Mtreemix: a software package for learning and using mixture models of mutagenetic trees. Bioinformatics 21(9): 2106-2107 (2005)
18EENiko Beerenwinkel, Jörg Rahnenführer, Martin Däumer, Daniel Hoffmann, Rolf Kaiser, Joachim Selbig, Thomas Lengauer: Learning Multiple Evolutionary Pathways from Cross-Sectional Data. Journal of Computational Biology 12(6): 584-598 (2005)
2004
17 Matthias Scholz, Yves Gibon, Mark Stitt, Joachim Selbig: Independent components analysis of starch deficient pgm mutants. German Conference on Bioinformatics 2004: 95-104
16EENiko Beerenwinkel, Jörg Rahnenführer, Martin Däumer, Daniel Hoffmann, Rolf Kaiser, Joachim Selbig, Thomas Lengauer: Learning multiple evolutionary pathways from cross-sectional data. RECOMB 2004: 36-44
15EECarsten O. Daub, Ralf Steuer, Joachim Selbig, Sebastian Kloska: Estimating mutual information using B-spline functions - an improved similarity measure for analysing gene expression data. BMC Bioinformatics 5: 118 (2004)
14EEAndré Flöter, Jacques Nicolas, Torsten Schaub, Joachim Selbig: Threshold extraction in metabolite concentration data. Bioinformatics 20(10): 1491-1494 (2004)
13EEDirk Steinhauser, Björn H. Junker, Alexander Lüdemann, Joachim Selbig, Joachim Kopka: Hypothesis-driven approach to predict transcriptional units from gene expression data. Bioinformatics 20(12): 1928-1939 (2004)
12EEMatthias Scholz, S. Gatzek, A. Sterling, Oliver Fiehn, Joachim Selbig: Metabolite fingerprinting: detecting biological features by independent component analysis. Bioinformatics 20(15): 2447-2454 (2004)
11EEAlexander Lüdemann, Daniel Weicht, Joachim Selbig, Joachim Kopka: PaVESy: Pathway Visualization and Editing System. Bioinformatics 20(16): 2841-2844 (2004)
2003
10 André Flöter, Jacques Nicolas, Torsten Schaub, Joachim Selbig: Threshold extraction in metabolite concentration data. German Conference on Bioinformatics 2003: 33-39
9EENiko Beerenwinkel, Thomas Lengauer, Martin Däumer, Rolf Kaiser, Hauke Walter, Klaus Korn, Daniel Hoffmann, Joachim Selbig: Methods for optimizing antiviral combination therapies. ISMB (Supplement of Bioinformatics) 2003: 16-25
8 Carsten O. Daub, Sebastian Kloska, Joachim Selbig: MetaGeneAlyse: analysis of integrated transcriptional and metabolite data. Bioinformatics 19(17): 2332-2333 (2003)
7 Niko Beerenwinkel, Martin Däumer, Mark Oette, Klaus Korn, Daniel Hoffmann, Rolf Kaiser, Thomas Lengauer, Joachim Selbig, Hauke Walter: Geno2pheno: estimating phenotypic drug resistance from HIV-1 genotypes. Nucleic Acids Research 31(13): 3850-3855 (2003)
2002
6 Ralph E. Steuer, Jürgen Kurths, Carsten O. Daub, Janko Weise, Joachim Selbig: The mutual information: Detecting and evaluating dependencies between variables. ECCB 2002: 231-240
2001
5 Niko Beerenwinkel, Barbara Schmidt, Hauke Walter, Rolf Kaiser, Thomas Lengauer, Daniel Hoffmann, Klaus Korn, Joachim Selbig: Identifying drug resistance-associated patterns in HIV genotypes. German Conference on Bioinformatics 2001: 126-130
4EENiko Beerenwinkel, Barbara Schmidt, Hauke Walter, Rolf Kaiser, Thomas Lengauer, Daniel Hoffmann, Klaus Korn, Joachim Selbig: Geno2pheno: Interpreting Genotypic HIV Drug Resistance Tests. IEEE Intelligent Systems 16(6): 35-41 (2001)
1999
3 Joachim Selbig, Heinz-Theodor Mevissen, Thomas Lengauer: Decision tree-based formation of consensus protein secondary structure prediction. Bioinformatics 15(12): 1039-1046 (1999)
1986
2 Joachim Selbig: Knowledge Acquisition by Inductive Learning from Examples. AII 1986: 145-163
1981
1 Fritz Wysotzki, Werner Kolbe, Joachim Selbig: Concept Learning by Structured Examples - An Algebraic Approach. IJCAI 1981: 153-158

Coauthor Index

1Niko Beerenwinkel [4] [5] [7] [9] [16] [18] [19] [20] [26]
2Thomas Berg [20]
3Bernd Blasius [28]
4Patrick Braun [20]
5Joachim Büch [26]
6Carsten O. Daub [6] [8] [15]
7Martin Däumer [7] [9] [16] [18] [20] [26]
8Pawel Durek [32] [35]
9Steve Dworschak [33]
10Oliver Ebenhöh [34]
11Claudia Falter [31]
12Gerd Fätkenheuer [20]
13Alisdair R. Fernie [23] [28]
14Oliver Fiehn [12]
15Roman Fischer [20]
16André Flöter [10] [14]
17S. Gatzek [12]
18Yves Gibon [17]
19Susanne Grell [24] [33]
20Sergio Grimbs [34]
21Thilo Gross [28]
22Charles L. Guy [21]
23Matthew A. Hannah [29]
24Joshua L. Heazlewood [32]
25Manuela Hische [23]
26Daniel Hoffmann [4] [5] [7] [9] [16] [18] [19] [20] [26]
27Jan Hummel [22] [30] [32]
28Björn H. Junker [13]
29Rolf Kaiser [4] [5] [7] [9] [16] [18] [19] [20] [26]
30Fatma Kaplan [21]
31Nima Keshvari [22]
32Sebastian Kloska [8] [15]
33Werner Kolbe [1]
34Joachim Kopka [11] [13] [21]
35Klaus Korn [4] [5] [7] [9] [20]
36Bernd Kupfer [20]
37Jürgen Kurths [6]
38Thomas Lengauer [3] [4] [5] [7] [9] [16] [18] [19] [20] [26]
39Alexander Lüdemann [11] [13]
40Heinz-Theodor Mevissen [3]
41Adriano Nunes Nesi [28]
42Jacques Nicolas [10] [14]
43Michaela Niemann [30]
44Victoria J. Nikiforova [33]
45Zoran Nikoloski [34]
46Mark Oette [7] [20]
47Jörg Rahnenführer [16] [18] [19] [20]
48Henning Redestig [25] [27] [29]
49Dirk Repsilber [23]
50Jürgen K. Rockstroh [20]
51Kirsten Roomp [20] [26]
52Igor Savenkov [20]
53Torsten Schaub [10] [14] [24] [33]
54Nicolas Schauer [23]
55Alexander Schliep [31]
56Barbara Schmidt [4] [5]
57Matthias Scholz [12] [17] [21] [27]
58Christian Schudoma [35]
59Eugen Schülter [26]
60Waltraud X. Schulze [30] [32]
61Saleta Sierra-Aragon [26]
62Tobias Sing [20] [26]
63Florian Sohler [25]
64Wolfram Stacklies [27]
65Matthias Steinfath [23]
66Dirk Steinhauser [13] [30]
67A. Sterling [12]
68Ralf Steuer [15] [28]
69Ralph E. Steuer [6]
70Mark Stitt [17]
71Martin Vingron [31]
72Hauke Walter [4] [5] [7] [9] [20]
73Dirk Walther [27] [30] [31] [32] [35]
74Wolfram Weckwerth [22] [30] [32] [35]
75Daniel Weicht [11] [29]
76Janko Weise [6]
77Stefanie Wienkoop [30]
78Fritz Wysotzki [1]
79Ralf Zimmer [25]

Colors in the list of coauthors

Copyright © Tue Nov 3 08:52:44 2009 by Michael Ley (ley@uni-trier.de)