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Michael Schroeder

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2007
81 Werner Dubitzky, Assaf Schuster, Peter M. A. Sloot, Michael Schroeder, Mathilde Romberg: Distributed, High-Performance and Grid Computing in Computational Biology , International Workshop, GCCB 2006, Eilat, Israel, January 21, 2007, Proceeding Springer 2007
80EEDirk Labudde, Annalisa Marsico, K. Tanuj Sapra, Michael Schroeder: Pattern Recognition of Single-Molecule Force Spectroscopy Data. ER Workshops 2007: 3-13
79 Frank Dressel, Annalisa Marsico, Anne Tuukkanen, Michael Schroeder, Dirk Labudde: Understanding of SMFS Barriers by Means of Energy Profiles. German Conference on Bioinformatics 2007: 90-99
78EEGihan Dawelbait, Christof Winter, Yanju Zhang, Christian Pilarsky, Robert Grützmann, Jörg-Christian Heinrich, Michael Schroeder: Structural templates predict novel protein interactions and targets from pancreas tumour gene expression data. ISMB/ECCB (Supplement of Bioinformatics) 2007: 115-124
77EEAnnalisa Marsico, Dirk Labudde, K. Tanuj Sapra, Daniel J. Muller, Michael Schroeder: A novel pattern recognition algorithm to classify membrane protein unfolding pathways with high-throughput single-molecule force spectroscopy. Bioinformatics 23(2): 231-236 (2007)
76EEBill Andreopoulos, Aijun An, Xiaogang Wang, Michalis Faloutsos, Michael Schroeder: Clustering by common friends finds locally significant proteins mediating modules. Bioinformatics 23(9): 1124-1131 (2007)
75EEEmanuela Merelli, Giuliano Armano, Nicola Cannata, Flavio Corradini, Mark d'Inverno, Andreas Doms, Phillip W. Lord, Andrew Martin, Luciano Milanesi, Steffen Möller, Michael Schroeder, Michael Luck: Agents in bioinformatics, computational and systems biology. Briefings in Bioinformatics 8(1): 45-59 (2007)
2006
74EEAnnalisa Marsico, K. Tanuj Sapra, Daniel J. Muller, Michael Schroeder, Dirk Labudde: A Structure-Based Analysis of Single Molecule Force Spectroscopy (SMFS) Data for Bacteriorhodopsin and Four Mutants. CompLife 2006: 162-172
73EETobias Kuhn, Loïc Royer, Norbert E. Fuchs, Michael Schroeder: Improving Text Mining with Controlled Natural Language: A Case Study for Protein Interactions. DILS 2006: 66-81
72EEAlexander Kozlenkov, Rafael Peñaloza, Vivek Nigam, Loïc Royer, Gihan Dawelbait, Michael Schroeder: Prova: Rule-Based Java Scripting for Distributed Web Applications: A Case Study in Bioinformatics. EDBT Workshops 2006: 899-908
71EECraig A. Stewart, Michael Schroeder, Concettina Guerra, Akihiko Konagaya: Topic 17: High-Performance Bioinformatics. Euro-Par 2006: 1125-1126
70EEAndreas Doms, Vaida Jakoniene, Patrick Lambrix, Michael Schroeder, Thomas Wächter: Ontologies and Text Mining as a Basis for a Semantic Web for the Life Sciences. Reasoning Web 2006: 164-183
69EEThomas Wächter, André Wobst, Michael Schroeder, He Tan, Patrick Lambrix: A corpus-driven approach for design, evolution and alignment of ontologies. Winter Simulation Conference 2006: 1595-1602
68EEJoan Teyra, Andreas Doms, Michael Schroeder, M. Teresa Pisabarro: SCOWLP: a web-based database for detailed characterization and visualization of protein interfaces. BMC Bioinformatics 7: 104 (2006)
67EEAndreas Henschel, Wan Kyu Kim, Michael Schroeder: Equivalent binding sites reveal convergently evolved interaction motifs. Bioinformatics 22(5): 550-555 (2006)
66EEMichael Schroeder, Eric Neumann: Editorial - Semantic Web for Life Sciences. J. Web Sem. 4(3): 167 (2006)
65EEChristof Winter, Andreas Henschel, Wan Kyu Kim, Michael Schroeder: SCOPPI: a structural classification of protein-protein interfaces. Nucleic Acids Research 34(Database-Issue): 310-314 (2006)
2005
64EEGihan Dawelbait, Christian Pilarsky, Yanju Zhang, Robert Grützmann, Michael Schroeder: Structural Protein Interactions Predict Kinase-Inhibitor Interactions in Upregulated Pancreas Tumour Genes Expression Data. CompLife 2005: 1-11
63 Bingding Huang, Michael Schroeder: Using residue propensities and tightness of fit to improve rigid-body protein-docking. German Conference on Bioinformatics 2005: 159-173
62EESungsam Gong, Giseok Yoon, Insoo Jang, Dan M. Bolser, Panos Dafas, Michael Schroeder, Hansol Choi, Yoobok Cho, Kyungsook Han, Sunghoon Lee, Hwanho Choi, Michael Lappe, Liisa Holm, Sangsoo Kim, Donghoon Oh, Jonghwa Bhak: PSIbase: a database of Protein Structural Interactome map (PSIMAP). Bioinformatics 21(10): 2541-2543 (2005)
61EEDaeui Park, Semin Lee, Dan M. Bolser, Michael Schroeder, Michael Lappe, Donghoon Oh, Jong Bhak: Comparative interactomics analysis of protein family interaction networks using PSIMAP (protein structural interactome map). Bioinformatics 21(15): 3234-3240 (2005)
60EEAndreas Doms, Michael Schroeder: GoPubMed: exploring PubMed with the Gene Ontology. Nucleic Acids Research 33(Web-Server-Issue): 783-786 (2005)
59EERalf Schweimeier, Michael Schroeder: A Parameterised Hierarchy of Argumentation Semantics for Extended Logic Programming and its Application to the Well-founded Semantics. TPLP 5(1-2): 207-242 (2005)
2004
58EEAlexander Kozlenkov, Michael Schroeder: PROVA: Rule-Based Java-Scripting for a Bioinformatics Semantic Web. DILS 2004: 17-30
57 Ralph Delfs, Andreas Doms, Alexander Kozlenkov, Michael Schroeder: GoPubMed: ontology-based literature search applied to Gene Ontology and PubMed. German Conference on Bioinformatics 2004: 169-178
56EERalf Schweimeier, Michael Schroeder: Fuzzy Unification and Argumentation for Well-Founded Semantics. SOFSEM 2004: 102-121
55EEPanos Dafas, Dan M. Bolser, Jacek Gomoluch, Jong Park, Michael Schroeder: Using convex hulls to extract interaction interfaces from known structures. Bioinformatics 20(10): 1486-1490 (2004)
54EEJacek Gomoluch, Michael Schroeder: Performance evaluation of market-based resource allocation for Grid computing. Concurrency - Practice and Experience 16(5): 469-475 (2004)
53EEFrançois Bry, Wolfgang E. Nagel, Michael Schroeder: Grid-Computing. Informatik Spektrum 27(6): 542-545 (2004)
2003
52 Michael Schroeder, Gerd Wagner: Rules and Rule Markup Languages for the Semantic Web, Second International Workshop, RuleML 2003, Sanibel Island, FL, USA, October 20, 2003, Proceedings Springer 2003
51EETshiamo Motshegwa, Michael Schroeder: Interaction Monitoring and Termination Detection for Agent Societies: Preliminary Results. ESAW 2003: 136-154
50EEPenny Noy, Michael Schroeder: Advancing Profile Use in Agent Societies. ESAW 2003: 360-375
49 Panos Dafas, Dan M. Bolser, Jacek Gomoluch, Jong Park, Michael Schroeder: Fast and efficient computation of domain-domaininteractions from known protein structures in the PDB. German Conference on Bioinformatics 2003: 27-32
48 Jacek Gomoluch, Michael Schroeder: Market-based Resource Allocation for Grid Computing: A Model and Simulation. Middleware Workshops 2003: 211-218
47 Panos Dafas, Jacek Gomoluch, Alexander Kozlenkov, Michael Schroeder: Structural Protein Interactions: From Months to Minutes. PARCO 2003: 677-684
46EEDan M. Bolser, Panos Dafas, Richard Harrington, Jong Park, Michael Schroeder: Visualisation and graph-theoretic analysis of a large-scale protein structural interactome. BMC Bioinformatics 4: 45 (2003)
45EERalf Schweimeier, Michael Schroeder: A Parameterised Hierarchy of Argumentation Semantics for Extended Logic Programming and its Application to the Well-founded Semantics CoRR cs.LO/0311008: (2003)
44EEJens Dietrich, Alexander Kozlenkov, Michael Schroeder, Gerd Wagner: Rule-based agents for the semantic web. Electronic Commerce Research and Applications 2(4): 323-338 (2003)
2002
43 Michael Schroeder, Gerd Wagner: RuleML 2002, Proceedings of the International Workshop on Rule Markup Languages for Business Rules on the Semantic Web, 14 June 2002, Sardinia, Italy (In conjunction with the First International Semantic Web Conference ISWC2002 and hosted by SIG2 of the OntoWeb Network CEUR-WS.org 2002
42EEPenny Noy, Michael Schroeder: Defining like-minded agents with the aid of visualization. AAMAS 2002: 1292-1293
41EEMichael Schroeder, Ralf Schweimeier: Fuzzy argumentation for negotiating agents. AAMAS 2002: 942-943
40 Michael Schroeder, Ralf Schweimeier: Arguments and Misunderstandings: Fuzzy Unification for Negotiating Agents. CLIMA III 2002: 1-18
39 Ralf Schweimeier, Michael Schroeder: Notions of Attack and Justified Arguments for Extended Logic Programs. ECAI 2002: 536-540
38 Ralf Schweimeier, Michael Schroeder: Well-founded argumentation semantics for extended logic programming. NMR 2002: 426-435
37 Carlos Viegas Damásio, Peter Fröhlich, Wolfgang Nejdl, Luís Moniz Pereira, Michael Schroeder: Using Extended Logic Programming for Alarm-Correlation in Cellular Phone Networks. Appl. Intell. 17(2): 187-202 (2002)
36EERalf Schweimeier, Michael Schroeder: Well-Founded Argumentation Semantics for Extended Logic Programming CoRR cs.LO/0207040: (2002)
35EESteffen Möller, Michael Schroeder, Rolf Apweiler: Consistent Integration of Non-reliable Heterogeneous Information Resources Applied to the Annotation of Transmembrane Proteins. Computers & Chemistry 26(1): 41-49 (2002)
34EEMichael Schroeder, Ralf Schweimeier: Arguments and Misunderstandings: Fuzzy Unification for Negotiating Agents. Electr. Notes Theor. Comput. Sci. 70(5): (2002)
33EEReinhold Kloos, Rolf Reinema, Michael Schroeder: Adaptive Traders for Communication in Cooperative Rooms. International Journal of Information Technology and Decision Making 1(3): 401-422 (2002)
2001
32EEMichael Schroeder, Luke Boro, Julie A. McCann: Efficiency improvements for interactions of web-agents. Agents 2001: 112-113
31EEMichael Schroeder, Penny Noy: Multi-agent visualisation based on multivariate data. Agents 2001: 85-91
30EEMichael Schroeder, Stefan Moser: Automatic Color Correction Based on Generic Content-Based Image Analysis. Color Imaging Conference 2001: 41-45
29EEJacek Gomoluch, Michael Schroeder: Flexible Load Balancing in Distributed Information Agent Systems. Multi-Agent-Systems and Applications 2001: 188-197
28 Michael Schroeder, David Gilbert, Jacques van Helden, Penny Noy: Approaches to visualisation in bioinformatics: from dendrograms to Space Explorer. Inf. Sci. 139(1-2): 19-57 (2001)
27 Patrick Cogan, Jacek Gomoluch, Michael Schroeder: A Quantitative and Qualitative Comparison of Distributed Information Processing Using Mobile Agents Realised in RMI and Voyager. International Journal of Software Engineering and Knowledge Engineering 11(5): 583-605 (2001)
26 Michael Schroeder, Jacek Gomoluch: Information agents on the move. Software Focus 2(2): 31-36 (2001)
2000
25EEMichael Schroeder, Julie A. McCann, Dan Haynes: Trading without Explicit Ontologies. AMEC 2000: 108-120
24EEMichael Schroeder, Julie A. McCann, Dan Haynes: Rough traders and intelligent clients. Agents 2000: 259-260
23EEPenny Noy, Michael Schroeder: Mobile Agents for Distributed Processing. Agents Workshop on Infrastructure for Multi-Agent Systems 2000: 263-265
22 David Gilbert, Michael Schroeder: FURY: Fuzzy Unification and Resolution Based on Edit Distance. BIBE 2000: 330-336
21EEJacques van Helden, David Gilbert, Lorenz Wernisch, Michael Schroeder, Shoshana J. Wodak: Application of Regulatory Sequence Analysis and Metabolic Network Analysis to the Interpretation of Gene Expression Data. JOBIM 2000: 147-164
20 Michael Schroeder, Gerd Wagner: Vivid Agents: Theory, Architecture, and Applications. Applied Artificial Intelligence 14(7): 645-675 (2000)
19EEMichael Schroeder: Towards a visualization of arguing agents. Future Generation Comp. Syst. 17(1): 15-26 (2000)
1999
18EEMichael Schroeder: Using Singular Value Decomposition to Visualise Relations Within Multi-Agent Systems. Agents 1999: 313-318
17 Michael Schroeder: Verification of Business Processes for a Correspondence Handling Center Using CCS. EUROVAV 1999: 253-264
16 Steffen Möller, Michael J. Wise, David P. Kreil, Michael Schroeder, D. Gilbest, Rolf Apweiler: Facilitating context-sensitive queries: A tool to rephrase SWISS-PROT. German Conference on Bioinformatics 1999: 216-218
15EEZhan Cui, Brian Odgers, Michael Schroeder: An In-Service Agent Monitoring and Analysis System. ICTAI 1999: 237-244
14 Peter Fröhlich, Wolfgang Nejdl, Michael Schroeder, Carlos Viegas Damásio, Luís Moniz Pereira: Using Extended Logic Programming for Alarm-Correlation in Cellular Phone Networks. IEA/AIE 1999: 343-352
13EEMichael Schroeder, Daniela Alina Plewe, Andreas Raab: ULTIMA RATIO - A Visual Language for Argumentation. IV 1999: 510-515
12 Michael Schroeder: An Efficient Argumentation Framework for Negtiating Autonomous Agents. MAAMAW 1999: 140-149
1998
11EEMichael Schroeder, Daniela Alina Plewe, Andreas Raab: Ultima Ratio: Should Hamlet kill Claudius? Agents 1998: 467-468
10 Peter Fröhlich, Wolfgang Nejdl, Michael Schroeder: Strategies in Model-Based Diagnosis. J. Autom. Reasoning 20(1): 81-105 (1998)
1997
9 Michael Schroeder, Iara de Almeida Móra, Luís Moniz Pereira: A Deliberative and Reactive Diagnosis Agent Based on Logic Programming. ATAL 1997: 293-307
8 Michael Schroeder, Gerd Wagner: Distributed Diagnosis by Vivid Agents. Agents 1997: 268-275
7 Michael Schroeder, Iara de Almeida Móra, José Júlio Alferes: Vivid Agents Arguing about Distributed Extended Logic Programs. EPIA 1997: 217-228
6 Carlos Viegas Damásio, Luís Moniz Pereira, Michael Schroeder: REVISE: Logic Programming and Diagnosis. LPNMR 1997: 354-363
5EEPeter Fröhlich, Iara de Almeida Móra, Wolfgang Nejdl, Michael Schroeder: Diagnostic Agents for Distributed Systems. ModelAge Workshop 1997: 173-186
4EERobert Tolksdorf, Ted Goddard, Muralidharan Srinivasan, Stefan Fünfrocken, Michael Schroeder: Working Group Report on Collaborative Agents in Distributed Web Applications. WETICE 1997: 133-138
1996
3 Michael Schroeder, Iara de Almeida Móra, Luís Moniz Pereira: A Deliberative and Reactive Diagnosis Agent Based on Logic Programming. ICTAI 1996: 436-437
2 Peter Fröhlich, Wolfgang Nejdl, Michael Schroeder: Design and Implementation of Diagnostic Strategies Using Modal Logic. JELIA 1996: 104-118
1995
1 Wolfgang Nejdl, Peter Fröhlich, Michael Schroeder: A Formal Framework for Representing Diagnosis Strategies in Model-Based Diagnosis Systems. IJCAI 1995: 1721-1727

Coauthor Index

1José Júlio Alferes [7]
2Aijun An [76]
3Bill Andreopoulos [76]
4Rolf Apweiler [16] [35]
5Giuliano Armano [75]
6Jong Bhak [61]
7Jonghwa Bhak [62]
8Dan M. Bolser [46] [49] [55] [61] [62]
9Luke Boro [32]
10François Bry (François Bry-Haußer) [53]
11Nicola Cannata [75]
12Yoobok Cho [62]
13Hansol Choi [62]
14Hwanho Choi [62]
15Patrick Cogan [27]
16Flavio Corradini [75]
17Zhan Cui [15]
18Panos Dafas [46] [47] [49] [55] [62]
19Carlos Viegas Damásio [6] [14] [37]
20Gihan Dawelbait [64] [72] [78]
21Ralph Delfs [57]
22Jens Dietrich [44]
23Andreas Doms [57] [60] [68] [70] [75]
24Frank Dressel [79]
25Werner Dubitzky [81]
26Michalis Faloutsos [76]
27Peter Fröhlich [1] [2] [5] [10] [14] [37]
28Norbert E. Fuchs [73]
29Stefan Fünfrocken [4]
30David Gilbert (David R. Gilbert) [21] [22] [28]
31D. Gilbest [16]
32Ted Goddard [4]
33Jacek Gomoluch [26] [27] [29] [47] [48] [49] [54] [55]
34Sungsam Gong [62]
35Robert Grützmann [64] [78]
36Concettina Guerra [71]
37Kyungsook Han [62]
38Richard Harrington [46]
39Dan Haynes [24] [25]
40Jörg-Christian Heinrich [78]
41Jacques van Helden [21] [28]
42Andreas Henschel [65] [67]
43Liisa Holm [62]
44Bingding Huang [63]
45Vaida Jakoniene [70]
46Insoo Jang [62]
47Sangsoo Kim [62]
48Wan Kyu Kim [65] [67]
49Reinhold Kloos [33]
50Akihiko Konagaya [71]
51Alexander Kozlenkov [44] [47] [57] [58] [72]
52David P. Kreil [16]
53Tobias Kuhn [73]
54Dirk Labudde [74] [77] [79] [80]
55Patrick Lambrix [69] [70]
56Michael Lappe [61] [62]
57Semin Lee [61]
58Sunghoon Lee [62]
59Phillip W. Lord [75]
60Michael Luck [75]
61Annalisa Marsico [74] [77] [79] [80]
62Andrew Martin [75]
63Julie A. McCann [24] [25] [32]
64Emanuela Merelli [75]
65Luciano Milanesi [75]
66Steffen Möller [16] [35] [75]
67Iara de Almeida Móra [3] [5] [7] [9]
68Stefan Moser [30]
69Tshiamo Motshegwa [51]
70Daniel J. Muller [74] [77]
71Wolfgang E. Nagel [53]
72Wolfgang Nejdl [1] [2] [5] [10] [14] [37]
73Eric Neumann [66]
74Vivek Nigam [72]
75Penny Noy [23] [28] [31] [42] [50]
76Brian Odgers [15]
77Donghoon Oh [61] [62]
78Daeui Park [61]
79Jong Park [46] [49] [55]
80Rafael Peñaloza [72]
81Luís Moniz Pereira (Luíz Moniz Pereira) [3] [6] [9] [14] [37]
82Christian Pilarsky [64] [78]
83M. Teresa Pisabarro [68]
84Daniela Alina Plewe [11] [13]
85Andreas Raab [11] [13]
86Rolf Reinema [33]
87Mathilde Romberg [81]
88Loïc Royer [72] [73]
89K. Tanuj Sapra [74] [77] [80]
90Assaf Schuster [81]
91Ralf Schweimeier [34] [36] [38] [39] [40] [41] [45] [56] [59]
92Peter M. A. Sloot [81]
93Muralidharan Srinivasan [4]
94Craig A. Stewart [71]
95He Tan [69]
96Joan Teyra [68]
97Robert Tolksdorf [4]
98Anne Tuukkanen [79]
99Thomas Wächter [69] [70]
100Gerd Wagner [8] [20] [43] [44] [52]
101Xiaogang Wang [76]
102Lorenz Wernisch [21]
103Christof Winter [65] [78]
104Michael J. Wise [16]
105André Wobst [69]
106Shoshana J. Wodak [21]
107Giseok Yoon [62]
108Yanju Zhang [64] [78]
109Mark d'Inverno [75]

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