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Nagiza F. Samatova Vis

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*2009
32 Wenbin Chen, Matthew C. Schmidt, Wenhong Tian, Nagiza F. Samatova: A Fast, Accurate Algorithm for Identifying Functional Modules Through Pairwise Local Alignment of Protein Interaction Networks. BIOCOMP 2009: 816-821
31EEWilliam Hendrix, Matthew C. Schmidt, Paul Breimyer, Nagiza F. Samatova: On perturbation theory and an algorithm for maximal clique enumeration in uncertain and noisy graphs. KDD Workshop on Knowledge Discovery from Uncertain Data 2009: 48-56
30EEMatthew C. Schmidt, Nagiza F. Samatova, Kevin Thomas, Byung-Hoon Park: A scalable, parallel algorithm for maximal clique enumeration. J. Parallel Distrib. Comput. 69(4): 417-428 (2009)
29EEWenbin Chen, Matthew C. Schmidt, Nagiza F. Samatova: On parameterized complexity of the Multi-MCS problem. Theor. Comput. Sci. 410(21-23): 2024-2032 (2009)
2008
28EEByung-Hoon Park, Nagiza F. Samatova, Rajesh Munavalli, Ramya Krishnamurthy, Houssain Kettani, Al Geist: Rapid and robust ranking of text documents in a dynamically changing corpus. AICCSA 2008: 149-155
27EEByung-Hoon Park, Matthew C. Schmidt, Kevin Thomas, Tatiana V. Karpinets, Nagiza F. Samatova: Parallel, scalable, memory-efficient backtracking for combinatoria modeling of large-scale biological systems. IPDPS 2008: 1-8
26EEHeshan Lin, Xiaosong Ma, Jiangtian Li, Ting Yu, Nagiza F. Samatova: Adaptive Request Scheduling for Parallel Scientific Web Services. SSDBM 2008: 276-294
25EEBing Zhang, Byung-Hoon Park, Tatiana V. Karpinets, Nagiza F. Samatova: From pull-down data to protein interaction networks and complexes with biological relevance. Bioinformatics 24(7): 979-986 (2008)
2007
24EEFaisal N. Abu-Khzam, Nagiza F. Samatova, Mohamad A. Rizk, Michael A. Langston: The Maximum Common Subgraph Problem: Faster Solutions via Vertex Cover. AICCSA 2007: 367-373
23EEByung-Hoon Park, Bing Zhang, Tatiana V. Karpinets, Nagiza F. Samatova: Multi-stage Framework to Infer Protein Functional Modules from Mass Spectrometry Pull-Down Data with Assessment of Biological Relevance. BIBM 2007: 223-229
22EEXiaosong Ma, Jiangtian Li, Nagiza F. Samatova: Automatic Parallelization of Scripting Languages: Toward Transparent Desktop Parallel Computing. IPDPS 2007: 1-6
21EEFaisal N. Abu-Khzam, Mohamad A. Rizk, Deema A. Abdallah, Nagiza F. Samatova: The Buffered Work-Pool Approach for Search-Tree Based Optimization Algorithms. PPAM 2007: 170-179
20EEByung-Hoon Park, George Ostrouchov, Nagiza F. Samatova: Sampling streaming data with replacement. Computational Statistics & Data Analysis 52(2): 750-762 (2007)
19EERobert Sisneros, Chad Jones, Jian Huang, Jinzhu Gao, Byung-Hoon Park, Nagiza F. Samatova: A Multi-Level Cache Model for Run-Time Optimization of Remote Visualization. IEEE Trans. Vis. Comput. Graph. 13(5): 991-1003 (2007)
2006
18EEChristopher T. Symons, Nagiza F. Samatova, Ramya Krishnamurthy, Byung-Hoon Park, Tarik Umar, David Buttler, Terence Critchlow, David Hysom: Multi-Criterion Active Learning in Conditional Random Fields. ICTAI 2006: 323-331
17EEJames M. McCollum, Gregory D. Peterson, Chris D. Cox, Michael L. Simpson, Nagiza F. Samatova: The sorting direct method for stochastic simulation of biochemical systems with varying reaction execution behavior. Computational Biology and Chemistry 30(1): 39-49 (2006)
2005
16EEW. Henry Suters, Faisal N. Abu-Khzam, Yun Zhang, Christopher T. Symons, Nagiza F. Samatova, Michael A. Langston: A New Approach and Faster Exact Methods for the Maximum Common Subgraph Problem. COCOON 2005: 717-727
15 Brandon Thurmon, James M. McCollum, Gregory D. Peterson, Chris D. Cox, Nagiza F. Samatova, Gary Sayler, Michael L. Simpson: Accelerating Exact Stochastic Simulation Using Reconfigurable Computing. ERSA 2005: 105-111
14EEHeshan Lin, Xiaosong Ma, Praveen Chandramohan, Al Geist, Nagiza F. Samatova: Efficient Data Access for Parallel BLAST. IPDPS 2005
13 Srikanth B. Yoginath, Nagiza F. Samatova, David Bauer, Guruprasade Kora, George Fann, Al Geist: RScaLAPACK: High-Performance Parallel Statistical Computing with R and ScaLAPACK. ISCA PDCS 2005: 61-67
12EEYun Zhang, Faisal N. Abu-Khzam, Nicole E. Baldwin, Elissa J. Chesler, Michael A. Langston, Nagiza F. Samatova: Genome-Scale Computational Approaches to Memory-Intensive Applications in Systems Biology. SC 2005: 12
11EEGeorge Ostrouchov, Nagiza F. Samatova: On FastMap and the Convex Hull of Multivariate Data: Toward Fast and Robust Dimension Reduction. IEEE Trans. Pattern Anal. Mach. Intell. 27(8): 1340-1343 (2005)
2004
10EEGong-Xin Yu, Byung-Hoon Park, Praveen Chandramohan, Al Geist, Nagiza F. Samatova: In-Silico Prediction of Surface Residue Clusters for Enzyme-Substrate Specificity. CSB 2004: 696-697
9EEByung-Hoon Park, George Ostrouchov, Nagiza F. Samatova, Al Geist: Reservoir-Based Random Sampling with Replacement from Data Stream. SDM 2004
2003
8EEGong-Xin Yu, George Ostrouchov, Al Geist, Nagiza F. Samatova: An SVM-based Algorithm for Identification of Photosynthesis-specific Genome Features. CSB 2003: 235-243
7EEByung-Hoon Park, George Ostrouchov, Gong-Xin Yu, Al Geist, Andrey Gorin, Nagiza F. Samatova: Inference of Protein-Protein Interactions by Unlikely Profile Pair. ICDM 2003: 735-738
6 E. Wes Bethel, Greg Abram, John Shalf, Randy Frank, James P. Ahrens, Steve Parker, Nagiza F. Samatova, Mark Miller: Interoperability of Visualization Software and Data Models is NOT an Achievable Goal. IEEE Visualization 2003: 607-610
2002
5EEThomas E. Potok, Mark T. Elmore, Joel W. Reed, Nagiza F. Samatova: An Ontology-Based HTML to XML Conversion Using Intelligent Agents. HICSS 2002: 120
4 Faisal N. Abu-Khzam, Nagiza F. Samatova, George Ostrouchov, Michael A. Langston, Al Geist: Distributed Dimension Reduction Algorithms for Widely Dispersed Data. IASTED PDCS 2002: 167-174
3EENagiza F. Samatova, Al Geist, George Ostrouchov, Anatoli V. Melechko: Parallel Out-of-Core Algorithm for Genome-Scale Enumeration of Metabolic Systemic Pathways. IPDPS 2002
2 Nagiza F. Samatova, George Ostrouchov, Al Geist, Anatoli V. Melechko: RACHET: An Efficient Cover-Based Merging of Clustering Hierarchies from Distributed Datasets. Distributed and Parallel Databases 11(2): 157-180 (2002)
2000
1 Thomas E. Potok, Nenad Ivezic, Nagiza F. Samatova: Agent-based Architecture for Flexible Lean Cell Design, Analysis and Evaluation. DIISM 2000: 181-188

Coauthor Index

1Deema A. Abdallah [21]
2Greg Abram [6]
3Faisal N. Abu-Khzam [4] [12] [16] [21] [24]
4James P. Ahrens [6]
5Nicole E. Baldwin [12]
6David Bauer [13]
7E. Wes Bethel (Wes Bethel) [6]
8Paul Breimyer [31]
9David Buttler [18]
10Praveen Chandramohan [10] [14]
11Wenbin Chen [29] [32]
12Elissa J. Chesler [12]
13Chris D. Cox [15] [17]
14Terence Critchlow [18]
15Mark T. Elmore [5]
16George Fann [13]
17Randy Frank [6]
18Jinzhu Gao [19]
19Al Geist (G. A. Geist II) [2] [3] [4] [7] [8] [9] [10] [13] [14] [28]
20Andrey Gorin [7]
21William Hendrix [31]
22Jian Huang [19]
23David Hysom [18]
24Nenad Ivezic [1]
25Chad Jones [19]
26Tatiana V. Karpinets [23] [25] [27]
27Houssain Kettani [28]
28Guruprasade Kora [13]
29Ramya Krishnamurthy [18] [28]
30Michael A. Langston [4] [12] [16] [24]
31Jiangtian Li [22] [26]
32Heshan Lin [14] [26]
33Xiaosong Ma [14] [22] [26]
34James M. McCollum [15] [17]
35Anatoli V. Melechko [2] [3]
36Mark Miller [6]
37Rajesh Munavalli [28]
38George Ostrouchov [2] [3] [4] [7] [8] [9] [11] [20]
39Byung-Hoon Park [7] [9] [10] [18] [19] [20] [23] [25] [27] [28] [30]
40Steve Parker [6]
41Gregory D. Peterson [15] [17]
42Thomas E. Potok [1] [5]
43Joel W. Reed [5]
44Mohamad A. Rizk [21] [24]
45Gary Sayler [15]
46Matthew C. Schmidt [27] [29] [30] [31] [32]
47John Shalf [6]
48Michael L. Simpson [15] [17]
49Robert Sisneros [19]
50W. Henry Suters [16]
51Christopher T. Symons [16] [18]
52Kevin Thomas [27] [30]
53Brandon Thurmon [15]
54Wenhong Tian [32]
55Tarik Umar [18]
56Srikanth B. Yoginath [13]
57Gong-Xin Yu [7] [8] [10]
58Ting Yu [26]
59Bing Zhang [23] [25]
60Yun Zhang [12] [16]

Copyright © Tue Nov 3 08:52:44 2009 by Michael Ley (ley@uni-trier.de)