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Eytan Ruppin Vis

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*2009
73EETamir Tuller, Hadas Birin, Martin Kupiec, Eytan Ruppin: Co-evolutionary Models for Reconstructing Ancestral Genomic Sequences: Computational Issues and Biological Examples. RECOMB-CG 2009: 164-180
72EEShira Mintz-Oron, Asaph Aharoni, Eytan Ruppin, Tomer Shlomi: Network-based prediction of metabolic enzymes' subcellular localization. Bioinformatics 25(12): (2009)
2008
71EEBanu Dost, Tomer Shlomi, Nitin Gupta, Eytan Ruppin, Vineet Bafna, Roded Sharan: QNet: A Tool for Querying Protein Interaction Networks. Journal of Computational Biology 15(7): 913-925 (2008)
2007
70EEOved Ourfali, Tomer Shlomi, Trey Ideker, Eytan Ruppin, Roded Sharan: SPINE: a framework for signaling-regulatory pathway inference from cause-effect experiments. ISMB/ECCB (Supplement of Bioinformatics) 2007: 359-366
69EELiat Segal, Michal Lapidot, Zach Solan, Eytan Ruppin, Yitzhak Pilpel, David Horn: Nucleotide variation of regulatory motifs may lead to distinct expression patterns. ISMB/ECCB (Supplement of Bioinformatics) 2007: 440-449
68EEBanu Dost, Tomer Shlomi, Nitin Gupta, Eytan Ruppin, Vineet Bafna, Roded Sharan: QNet: A Tool for Querying Protein Interaction Networks. RECOMB 2007: 1-15
67EEIrit Fishel, Alon Kaufman, Eytan Ruppin: Meta-analysis of gene expression data: a predictor-based approach. Bioinformatics 23(13): 1599-1606 (2007)
66EEOleg Rokhlenko, Tomer Shlomi, Roded Sharan, Eytan Ruppin, Ron Y. Pinter: Constraint-based functional similarity of metabolic genes: going beyond network topology. Bioinformatics 23(16): 2139-2146 (2007)
65EENir Yosef, Zohar Yakhini, Anya Tsalenko, Vessela Kristensen, Anne-Lise Børresen-Dale, Eytan Ruppin, Roded Sharan: A supervised approach for identifying discriminating genotype patterns and its application to breast cancer data. Bioinformatics 23(2): 91-98 (2007)
64EEItay Mayrose, Osnat Penn, Elana Erez, Nimrod D. Rubinstein, Tomer Shlomi, Natalia Tarnovitski Freund, Erez M. Bublil, Eytan Ruppin, Roded Sharan, Jonathan M. Gershoni, Eric Martz, Tal Pupko: Pepitope: epitope mapping from affinity-selected peptides. Bioinformatics 23(23): 3244-3246 (2007)
63EEShay Cohen, Gideon Dror, Eytan Ruppin: Feature Selection via Coalitional Game Theory. Neural Computation 19(7): 1939-1961 (2007)
2006
62EENir Yosef, Alon Kaufman, Eytan Ruppin: Inferring Functional Pathways from Multi-Perturbation Data. ISMB (Supplement of Bioinformatics) 2006: 539-546
61EEAmit Kagian, Gideon Dror, Tommer Leyvand, Daniel Cohen-Or, Eytan Ruppin: A Humanlike Predictor of Facial Attractiveness. NIPS 2006: 649-656
60EEOleg Rokhlenko, Tomer Shlomi, Roded Sharan, Eytan Ruppin, Ron Y. Pinter: Flux-Based vs. Topology-Based Similarity of Metabolic Genes. WABI 2006: 274-285
59EEKeren Saggie-Wexler, Alon Keinan, Eytan Ruppin: Neural Processing of Counting in Evolved Spiking and McCulloch-Pitts Agents. Artificial Life 12(1): 1-16 (2006)
58EEAlon Keinan, Ben Sandbank, Claus C. Hilgetag, Isaac Meilijson, Eytan Ruppin: Axiomatic Scalable Neurocontroller Analysis via the Shapley Value. Artificial Life 12(3): 333-352 (2006)
57EEZohar Ganon, Alon Keinan, Eytan Ruppin: Neurocontroller Analysis via Evolutionary Network Minimization. Artificial Life 12(3): 435-448 (2006)
56EETomer Shlomi, Daniel Segal, Eytan Ruppin, Roded Sharan: QPath: a method for querying pathways in a protein-protein interaction network. BMC Bioinformatics 7: 199 (2006)
55EEYael Eisenthal, Gideon Dror, Eytan Ruppin: Facial Attractiveness: Beauty and the Machine. Neural Computation 18(1): 119-142 (2006)
2005
54EEVered Kunik, Zach Solan, Shimon Edelman, Eytan Ruppin, David Horn: Motif Extraction and Protein Classification. CSB 2005: 80-85
53EEShay Cohen, Eytan Ruppin, Gideon Dror: Feature Selection Based on the Shapley Value. IJCAI 2005: 665-670
52EESilpa Suthram, Tomer Shlomi, Eytan Ruppin, Roded Sharan, Trey Ideker: Comparison of Protein-Protein Interaction Confidence Assignment Schemes. Systems Biology and Regulatory Genomics 2005: 39-50
2004
51EEAlon Kaufman, Martin Kupiec, Eytan Ruppin: Multi-Knockout Genetic Network Analysis: The Rad6 Example. CSB 2004: 332-340
50EEAlon Keinan, Ben Sandbank, Claus C. Hilgetag, Isaac Meilijson, Eytan Ruppin: Fair Attribution of Functional Contribution in Artificial and Biological Networks. Neural Computation 16(9): 1887-1915 (2004)
49EEAlon Keinan, Claus C. Hilgetag, Isaac Meilijson, Eytan Ruppin: Causal localization of neural function: the Shapley value method. Neurocomputing 58-60: 215-222 (2004)
48EEKeren Saggie, Alon Keinan, Eytan Ruppin: Spikes that count: rethinking spikiness in neurally embedded systems. Neurocomputing 58-60: 303-311 (2004)
2003
47EEKeren Saggie, Alon Keinan, Eytan Ruppin: Solving a Delayed Response Task with Spiking. ECAL 2003: 199-208
46EEZohar Ganon, Alon Keinan, Eytan Ruppin: Evolutionary Network Minimization: Adaptive Implicit Pruning of Successful Agents. ECAL 2003: 319-327
45EEHezi Avraham, Gal Chechik, Eytan Ruppin: Are There Representations in Embodied Evolved Agents? Taking Measures. ECAL 2003: 743-752
44EEZach Solan, David Horn, Eytan Ruppin, Shimon Edelman: Unsupervised Context Sensitive Language Acquisition from a Large Corpus. NIPS 2003
43 Lior Segev, Ranit Aharonov, Isaac Meilijson, Eytan Ruppin: High-Dimensional Analysis of Evolutionary Autonomous Agents. Artificial Life 9(1): 1-20 (2003)
42 Shlomy Boshy, Eytan Ruppin: Evolving Small Neurocontrollers with Self-Organized Compact Encoding. Artificial Life 9(2): 131-151 (2003)
41EERanit Aharonov, Lior Segev, Isaac Meilijson, Eytan Ruppin: Localization of Function via Lesion Analysis. Neural Computation 15(4): 885-913 (2003)
2002
40EEZach Solan, Eytan Ruppin, David Horn, Shimon Edelman: Automatic Acquisition and Efficient Representation of Syntactic Structures. NIPS 2002: 91-98
39EELev Finkelstein, Evgeniy Gabrilovich, Yossi Matias, Ehud Rivlin, Zach Solan, Gadi Wolfman, Eytan Ruppin: Placing search in context: the concept revisited. ACM Trans. Inf. Syst. 20(1): 116-131 (2002)
38EEDaphna Joel, Yael Niv, Eytan Ruppin: Actor-critic models of the basal ganglia: new anatomical and computational perspectives. Neural Networks 15(4-6): 535-547 (2002)
37EEYael Niv, Daphna Joel, Isaac Meilijson, Eytan Ruppin: Evolution of reinforcement learning in foraging bees: a simple explanation for risk averse behavior. Neurocomputing 44-46: 951-956 (2002)
2001
36EERanit Aharonov, Isaac Meilijson, Eytan Ruppin: Understanding the Agent's Brain: A Quantitative Approach. ECAL 2001: 216-225
35EEYael Niv, Daphna Joel, Isaac Meilijson, Eytan Ruppin: Evolution of Reinforcement Learning in Uncertain Environments: Emergence of Risk-Aversion and Matching. ECAL 2001: 252-261
34EELev Finkelstein, Evgeniy Gabrilovich, Yossi Matias, Ehud Rivlin, Zach Solan, Gadi Wolfman, Eytan Ruppin: Placing search in context: the concept revisited. WWW 2001: 406-414
33 Ranit Aharonov-Barki, Tuvik Beker, Eytan Ruppin: Emergence of Memory-Driven Command Neurons in Evolved Artificial Agents. Neural Computation 13(3): 691-716 (2001)
32 Gal Chechik, Isaac Meilijson, Eytan Ruppin: Effective Neuronal Learning with Ineffective Hebbian Learning Rules. Neural Computation 13(4): 817-840 (2001)
31EENir Levy, David Horn, Isaac Meilijson, Eytan Ruppin: Distributed synchrony in a cell assembly of spiking neurons. Neural Networks 14(6-7): 815-824 (2001)
30EETuvik Beker, Ranit Aharonov, Eytan Ruppin: Emerging command neuron circuitry in evolved autonomous agents. Neurocomputing 38-40: 1101-1106 (2001)
2000
29 Ranit Aharonov-Barki, Isaac Meilijson, Eytan Ruppin: Who Does What? A Novel Algorithm to Determine Function Localization. NIPS 2000: 3-9
28EEGal Chechik, Isaac Meilijson, Eytan Ruppin: Neuronal normalization provides effective learning through ineffective synaptic learning rules. Neurocomputing 32-33: 345-351 (2000)
27EEDavid Horn, Nir Levy, Eytan Ruppin: Distributed synchrony in an attractor of spiking neurons. Neurocomputing 32-33: 409-414 (2000)
26EEEyal Cohen, Nir Levy, Eytan Ruppin: Global vs. local processing of compressed representations: A computational model of visual search. Neurocomputing 32-33: 667-671 (2000)
1999
25 Ranit Aharonov-Barki, Tuvik Beker, Eytan Ruppin: Spontaneous Evolution of Command Neurons, Place Cells and Memory Mechanisms in Autonomous Agents. ECAL 1999: 246-255
24EEDavid Horn, Nir Levy, Isaac Meilijson, Eytan Ruppin: Distributed Synchrony of Spiking Neurons in a Hebbian Cell Assembly. NIPS 1999: 129-135
23EEGal Chechik, Isaac Meilijson, Eytan Ruppin: Effective Learning Requires Neuronal Remodeling of Hebbian Synapses. NIPS 1999: 96-102
22 Nir Levy, David Horn, Eytan Ruppin: Associative Memory in a Multimodular Network. Neural Computation 11(7): 1717-1737 (1999)
21 Gal Chechik, Isaac Meilijson, Eytan Ruppin: Neuronal Regulation: A Mechanism for Synaptic Pruning During Brain Maturation. Neural Computation 11(8): 2061-2080 (1999)
20EEDavid Horn, Nir Levy, Eytan Ruppin: The importance of nonlinear dendritic processing in multimodular memory networks. Neurocomputing 26-27: 389-394 (1999)
19EEGal Chechik, Isaac Meilijson, Eytan Ruppin: Neuronal regulation: A biologically plausible mechanism for efficient synaptic pruning in development. Neurocomputing 26-27: 633-639 (1999)
1998
18EEGal Chechik, Isaac Meilijson, Eytan Ruppin: Neuronal Regulation Implements Efficient Synaptic Pruning. NIPS 1998: 97-103
17 Eytan Ruppin, James A. Reggia: Seeking order in disorder: computational studies of neurologic and psychiatric diseases. Artificial Intelligence in Medicine 13(1-2): 1-12 (1998)
16 David Horn, Nir Levy, Eytan Ruppin: Memory Maintenance via Neuronal Regulation. Neural Computation 10(1): 1-18 (1998)
15 Asnat Greenstein-Messica, Eytan Ruppin: Synaptic Runaway In Associative Networks And The Pathogenesis Of Schizophrenia. Neural Computation 10(2): 451-465 (1998)
14 Gal Chechik, Isaac Meilijson, Eytan Ruppin: Synaptic Pruning In Development: A Computational Account. Neural Computation 10(7): 1759-1777 (1998)
1997
13 Nir Levy, David Horn, Eytan Ruppin: Multi-modular Associative Memory. NIPS 1997
12 Eyal Cohen, Eytan Ruppin: On Parallel versus Serial Processing: A Computational Study of Visual Search. NIPS 1997
1996
11 Moshe Sipper, Eytan Ruppin: Co-Evolving Cellular Architectures by Cellular Programming. International Conference on Evolutionary Computation 1996: 306-311
10EERegev Levi, Eytan Ruppin, Yossi Matias, James A. Reggia: Frequency-Spatial Transformation: A Proposal for Parsimonious Intra-Cortical Communication. Int. J. Neural Syst. 7(5): 591-598 (1996)
1995
9EEDavid Horn, Eytan Ruppin: Compensatory mechanisms in an attractor neural network model of schizophrenia. Neural Computation 7(1): 182-205 (1995)
8EEEytan Ruppin, James A. Reggia: Patterns of functional damage in neural network models of associative memory. Neural Computation 7(5): 1105-1127 (1995)
1994
7EEEytan Ruppin, James A. Reggia, David Horn: A Neural Model of Delusions and Hallucinations in Schizophrenia. NIPS 1994: 149-156
6EEEytan Ruppin, James A. Reggia: Patterns of damage in neural networks: The effects of lesion area, shape and number. NIPS 1994: 35-42
1993
5EEIsaac Meilijson, Eytan Ruppin: Optimal Signalling in Attractor Neural Networks. NIPS 1993: 485-492
4EEDavid Horn, Eytan Ruppin, Marius Usher, M. Herrmann: Neural Network Modeling of Memory Deterioration in Alzheimer's Disease. Neural Computation 5(5): 736-749 (1993)
1992
3EEIsaac Meilijson, Eytan Ruppin, Moshe Sipper: Single-Iteration Threshold Hamming Networks. NIPS 1992: 564-571
2EEIsaac Meilijson, Eytan Ruppin: History-Dependent Attractor Neural Networks. NIPS 1992: 572-579
1990
1EEEytan Ruppin, Yehezkel Yeshurun: An Attractor Neural Network Model of Recall and Recognition. NIPS 1990: 642-648

Coauthor Index

1Asaph Aharoni [72]
2Ranit Aharonov [30] [36] [41] [43]
3Ranit Aharonov-Barki [25] [29] [33]
4Hezi Avraham [45]
5Vineet Bafna [68] [71]
6Tuvik Beker [25] [30] [33]
7Hadas Birin [73]
8Anne-Lise Børresen-Dale [65]
9Shlomy Boshy [42]
10Erez M. Bublil [64]
11Gal Chechik [14] [18] [19] [21] [23] [28] [32] [45]
12Eyal Cohen [12] [26]
13Shay Cohen [53] [63]
14Daniel Cohen-Or [61]
15Banu Dost [68] [71]
16Gideon Dror [53] [55] [61] [63]
17Shimon Edelman [40] [44] [54]
18Yael Eisenthal [55]
19Elana Erez [64]
20Lev Finkelstein [34] [39]
21Irit Fishel [67]
22Natalia Tarnovitski Freund [64]
23Evgeniy Gabrilovich [34] [39]
24Zohar Ganon [46] [57]
25Jonathan M. Gershoni [64]
26Asnat Greenstein-Messica [15]
27Nitin Gupta [68] [71]
28M. Herrmann [4]
29Claus C. Hilgetag [49] [50] [58]
30David Horn [4] [7] [9] [13] [16] [20] [22] [24] [27] [31] [40] [44] [54] [69]
31Trey Ideker [52] [70]
32Daphna Joel [35] [37] [38]
33Amit Kagian [61]
34Alon Kaufman [51] [62] [67]
35Alon Keinan [46] [47] [48] [49] [50] [57] [58] [59]
36Vessela Kristensen [65]
37Vered Kunik [54]
38Martin Kupiec [51] [73]
39Michal Lapidot [69]
40Regev Levi [10]
41Nir Levy [13] [16] [20] [22] [24] [26] [27] [31]
42Tommer Leyvand [61]
43Eric Martz [64]
44Yossi Matias [10] [34] [39]
45Itay Mayrose [64]
46Isaac Meilijson [2] [3] [5] [14] [18] [19] [21] [23] [24] [28] [29] [31] [32] [35] [36] [37] [41] [43] [49] [50] [58]
47Shira Mintz-Oron [72]
48Yael Niv [35] [37] [38]
49Oved Ourfali [70]
50Osnat Penn [64]
51Yitzhak Pilpel [69]
52Ron Y. Pinter [60] [66]
53Tal Pupko [64]
54James A. Reggia [6] [7] [8] [10] [17]
55Ehud Rivlin [34] [39]
56Oleg Rokhlenko [60] [66]
57Nimrod D. Rubinstein [64]
58Keren Saggie [47] [48]
59Keren Saggie-Wexler [59]
60Ben Sandbank [50] [58]
61Daniel Segal [56]
62Liat Segal [69]
63Lior Segev [41] [43]
64Roded Sharan [52] [56] [60] [64] [65] [66] [68] [70] [71]
65Tomer Shlomi [52] [56] [60] [64] [66] [68] [70] [71] [72]
66Moshe Sipper [3] [11]
67Zach Solan [34] [39] [40] [44] [54] [69]
68Silpa Suthram [52]
69Anya Tsalenko [65]
70Tamir Tuller [73]
71Marius Usher [4]
72Gadi Wolfman [34] [39]
73Zohar Yakhini [65]
74Yehezkel Yeshurun [1]
75Nir Yosef [62] [65]

Colors in the list of coauthors

Copyright © Tue Nov 3 08:52:44 2009 by Michael Ley (ley@uni-trier.de)