| * | 2009 |
| 12 | EE | Cristina Aurrecoechea,
John Brestelli,
Brian P. Brunk,
Jane M. Carlton,
Jennifer Dommer,
Steve Fischer,
Bindu Gajria,
Xin Gao,
Alan Gingle,
Gregory R. Grant,
Omar S. Harb,
Mark Heiges,
Frank Innamorato,
John Iodice,
Jessica C. Kissinger,
Eileen Kraemer,
Wei Li,
John A. Miller,
Hilary G. Morrison,
Vishal Nayak,
Cary Pennington,
Deborah F. Pinney,
David S. Roos,
Chris Ross,
Christian J. Stoeckert Jr.,
Steven Sullivan,
Charles Treatman,
Haiming Wang:
GiardiaDB and TrichDB: integrated genomic resources for the eukaryotic protist pathogens Giardia lamblia and Trichomonas vaginalis.
Nucleic Acids Research 37(Database-Issue): 526-530 (2009) |
| 11 | EE | Cristina Aurrecoechea,
John Brestelli,
Brian P. Brunk,
Jennifer Dommer,
Steve Fischer,
Bindu Gajria,
Xin Gao,
Alan Gingle,
Gregory R. Grant,
Omar S. Harb,
Mark Heiges,
Frank Innamorato,
John Iodice,
Jessica C. Kissinger,
Eileen Kraemer,
Wei Li,
John A. Miller,
Vishal Nayak,
Cary Pennington,
Deborah F. Pinney,
David S. Roos,
Chris Ross,
Christian J. Stoeckert Jr.,
Charles Treatman,
Haiming Wang:
PlasmoDB: a functional genomic database for malaria parasites.
Nucleic Acids Research 37(Database-Issue): 539-543 (2009) |
| 2008 |
| 10 | EE | Qian Liu,
Koby Crammer,
Fernando C. N. Pereira,
David S. Roos:
Reranking candidate gene models with cross-species comparison for improved gene prediction.
BMC Bioinformatics 9: (2008) |
| 9 | EE | Qian Liu,
Aaron J. Mackey,
David S. Roos,
Fernando C. N. Pereira:
Evigan: a hidden variable model for integrating gene evidence for eukaryotic gene prediction.
Bioinformatics 24(5): 597-605 (2008) |
| 8 | EE | Bindu Gajria,
Amit Bahl,
John Brestelli,
Jennifer Dommer,
Steve Fischer,
Xin Gao,
Mark Heiges,
John Iodice,
Jessica C. Kissinger,
Aaron J. Mackey,
Deborah F. Pinney,
David S. Roos,
Christian J. Stoeckert Jr.,
Haiming Wang,
Brian P. Brunk:
ToxoDB: an integrated Toxoplasma gondii database resource.
Nucleic Acids Research 36(Database-Issue): 553-556 (2008) |
| 2007 |
| 7 | EE | Lucia Peixoto,
David S. Roos:
Genomic scale analysis of lateral gene transfer in Apicomplexan parasites: insights into early eukaryotic evolution, host-pathogen interaction and drug target development.
BMC Bioinformatics 8(S-8): (2007) |
| 6 | EE | Cristina Aurrecoechea,
Mark Heiges,
Haiming Wang,
Zhiming Wang,
Steve Fischer,
Philippa Rhodes,
John A. Miller,
Eileen Kraemer,
Christian J. Stoeckert Jr.,
David S. Roos,
Jessica C. Kissinger:
ApiDB: integrated resources for the apicomplexan bioinformatics resource center.
Nucleic Acids Research 35(Database-Issue): 427-430 (2007) |
| 2006 |
| 5 | EE | Feng Chen,
Aaron J. Mackey,
Christian J. Stoeckert Jr.,
David S. Roos:
OrthoMCL-DB: querying a comprehensive multi-species collection of ortholog groups.
Nucleic Acids Research 34(Database-Issue): 363-368 (2006) |
| 2004 |
| 4 | | Li Li,
Jonathan Crabtree,
Steve Fischer,
Deborah F. Pinney,
Christian J. Stoeckert Jr.,
L. David Sibley,
David S. Roos:
ApiEST-DB: analyzing clustered EST data of the apicomplexan parasites.
Nucleic Acids Research 32(Database-Issue): 326-328 (2004) |
| 2003 |
| 3 | | Amit Bahl,
Brian P. Brunk,
Jonathan Crabtree,
Martin J. Fraunholz,
Bindu Gajria,
Gregory R. Grant,
Hagai Ginsburg,
Dinesh Gupta,
Jessica C. Kissinger,
Philip Labo,
Li Li,
Matthew D. Mailman,
Arthur J. Milgram,
David S. Pearson,
David S. Roos,
Jonathan Schug,
Christian J. Stoeckert Jr.,
Patricia L. Whetzel:
PlasmoDB: the Plasmodium genome resource. A database integrating experimental and computational data.
Nucleic Acids Research 31(1): 212-215 (2003) |
| 2 | | Jessica C. Kissinger,
Bindu Gajria,
Li Li,
Ian T. Paulsen,
David S. Roos:
ToxoDB: accessing the Toxoplasma gondii genome.
Nucleic Acids Research 31(1): 234-236 (2003) |
| 2002 |
| 1 | | Amit Bahl,
Brian P. Brunk,
Ross L. Coppel,
Jonathan Crabtree,
Sharon J. Diskin,
Martin J. Fraunholz,
Gregory R. Grant,
Dinesh Gupta,
Robert L. Huestis,
Jessica C. Kissinger,
Philip Labo,
Li Li,
Shannon K. McWeeney,
Arthur J. Milgram,
David S. Roos,
Jonathan Schug,
Christian J. Stoeckert Jr.:
PlasmoDB: the Plasmodium genome resource. An integrated database providing tools for accessing, analyzing and mapping expression and sequence data (both finished and unfinished).
Nucleic Acids Research 30(1): 87-90 (2002) |