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Suzanne M. Paley Vis

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*2009
24EEIngrid M. Keseler, César Bonavides-Martínez, Julio Collado-Vides, Socorro Gama-Castro, Robert P. Gunsalus, D. Aaron Johnson, Markus Krummenacker, Laura M. Nolan, Suzanne M. Paley, Ian T. Paulsen, Martín Peralta-Gil, Alberto D. Santos-Zavaleta, Alexander Glennon Shearer, Peter D. Karp: EcoCyc: A comprehensive view of Escherichia coli biology. Nucleic Acids Research 37(Database-Issue): 464-470 (2009)
2008
23EERon Caspi, Hartmut Foerster, Carol A. Fulcher, Pallavi Kaipa, Markus Krummenacker, Mario Latendresse, Suzanne M. Paley, Seung Yon Rhee, Alexander Glennon Shearer, Christophe Tissier, Thomas C. Walk, Peifen Zhang, Peter D. Karp: The MetaCyc Database of metabolic pathways and enzymes and the BioCyc collection of Pathway/Genome Databases. Nucleic Acids Research 36(Database-Issue): 623-631 (2008)
2006
22EERon Caspi, Hartmut Foerster, Carol A. Fulcher, Rebecca Hopkinson, John Ingraham, Pallavi Kaipa, Markus Krummenacker, Suzanne M. Paley, John Pick, Seung Yon Rhee, Christophe Tissier, Peifen Zhang, Peter D. Karp: MetaCyc: a multiorganism database of metabolic pathways and enzymes. Nucleic Acids Research 34(Database-Issue): 511-516 (2006)
2005
21EEMarkus Krummenacker, Suzanne M. Paley, Lukas A. Mueller, Thomas Yan, Peter D. Karp: Querying and computing with BioCyc databases. Bioinformatics 21(16): 3454-3455 (2005)
20EEIngrid M. Keseler, Julio Collado-Vides, Socorro Gama-Castro, John Ingraham, Suzanne M. Paley, Ian T. Paulsen, Martín Peralta-Gil, Peter D. Karp: EcoCyc: a comprehensive database resource for Escherichia coli. Nucleic Acids Research 33(Database-Issue): 334-337 (2005)
2004
19EEPeter D. Karp, Suzanne M. Paley, Cynthia J. Krieger, Peifen Zhang: An Evidence Ontology for Use in Pathway/Genome Databases. Pacific Symposium on Biocomputing 2004: 190-201
18 Cynthia J. Krieger, Peifen Zhang, Lukas A. Mueller, Alfred Wang, Suzanne M. Paley, Martha Arnaud, John Pick, Seung Yon Rhee, Peter D. Karp: MetaCyc: a multiorganism database of metabolic pathways and enzymes. Nucleic Acids Research 32(Database-Issue): 438-442 (2004)
2002
17 Peter D. Karp, Suzanne M. Paley, Pedro Romero: The Pathway Tools software. ISMB 2002: 225-232
16 Suzanne M. Paley, Peter D. Karp: Evaluation of computational metabolic-pathway predictions for Helicobacter pylori. Bioinformatics 18(5): 715-724 (2002)
15 Peter D. Karp, Monica Riley, Milton H. Saier Jr., Ian T. Paulsen, Julio Collado-Vides, Suzanne M. Paley, Alida Pellegrini-Toole, César Bonavides-Martínez, Socorro Gama-Castro: The EcoCyc Database. Nucleic Acids Research 30(1): 56-58 (2002)
14 Peter D. Karp, Monica Riley, Suzanne M. Paley, Alida Pellegrini-Toole: The MetaCyc Database. Nucleic Acids Research 30(1): 59-61 (2002)
2001
13 Peter D. Karp, Suzanne M. Paley, Jingchun Zhu: Database verification studies of SWISS-PROT and GenBank. Bioinformatics 17(6): 526-532 (2001)
2000
12 Peter D. Karp, Monica Riley, Milton H. Saier Jr., Ian T. Paulsen, Suzanne M. Paley, Alida Pellegrini-Toole: The EcoCyc and MetaCyc databases. Nucleic Acids Research 28(1): 56-59 (2000)
1999
11 Peter D. Karp, Vinay K. Chaudhri, Suzanne M. Paley: A Collaborative Environment for Authoring Large Knowledge Bases. J. Intell. Inf. Syst. 13(3): 155-194 (1999)
10 Peter D. Karp, Monica Riley, Suzanne M. Paley, Alida Pellegrini-Toole, Markus Krummenacker: Eco Cyc: encyclopedia of Escherichia coli genes and metabolism. Nucleic Acids Research 27(1): 55-58 (1999)
1998
9 Peter D. Karp, Monica Riley, Suzanne M. Paley, Alida Pellegrini-Toole, Markus Krummenacker: EcoCyc: Encyclopedia of Escherichia coli genes and metabolism. Nucleic Acids Research 26(1): 50-53 (1998)
1997
8 Suzanne M. Paley, John D. Lowrance, Peter D. Karp: A Generic Knowledge-Base Browser and Editor. AAAI/IAAI 1997: 1045-1051
7 Peter D. Karp, Monica Riley, Suzanne M. Paley, Alida Pellegrini-Toole, Markus Krummenacker: EcoCyc: Enyclopedia of Escherichia coli Genes and Metabolism. Nucleic Acids Research 25(1): 43-51 (1997)
1996
6 Peter D. Karp, Christos A. Ouzounis, Suzanne M. Paley: HinCyc: A Knowledge Base of the Complete Genome and Metabolic Pathways of H. influenzae. ISMB 1996: 116-124
5 Peter D. Karp, Suzanne M. Paley: Integrated Access to Metabolic and Genomic Data. Journal of Computational Biology 3(1): 191- (1996)
4 Peter D. Karp, Monica Riley, Suzanne M. Paley, Alida Pellegrini-Toole: EcoCyc: an encyclopedia of Escherichia coli genes and metabolism. Nucleic Acids Research 24(1): 32-39 (1996)
1995
3 Peter D. Karp, Suzanne M. Paley: Knowledge Representation in the Large. IJCAI (1) 1995: 751-758
1994
2EEPeter D. Karp, Suzanne M. Paley, Ira Greenberg: A Storage System for Scalable Knowledge Representation. CIKM 1994: 97-104
1 Peter D. Karp, Suzanne M. Paley: Representations of Metabolic Knowledge: Pathways. ISMB 1994: 203-211

Coauthor Index

1Martha Arnaud [18]
2César Bonavides-Martínez [15] [24]
3Ron Caspi [22] [23]
4Vinay K. Chaudhri [11]
5Julio Collado-Vides [15] [20] [24]
6Hartmut Foerster [22] [23]
7Carol A. Fulcher [22] [23]
8Socorro Gama-Castro [15] [20] [24]
9Ira Greenberg [2]
10Robert P. Gunsalus [24]
11Rebecca Hopkinson [22]
12John Ingraham [20] [22]
13D. Aaron Johnson [24]
14Pallavi Kaipa [22] [23]
15Peter D. Karp [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] [19] [20] [21] [22] [23] [24]
16Ingrid M. Keseler [20] [24]
17Cynthia J. Krieger [18] [19]
18Markus Krummenacker [7] [9] [10] [21] [22] [23] [24]
19Mario Latendresse [23]
20John D. Lowrance [8]
21Lukas A. Mueller [18] [21]
22Laura M. Nolan [24]
23Christos A. Ouzounis [6]
24Ian T. Paulsen [12] [15] [20] [24]
25Alida Pellegrini-Toole [4] [7] [9] [10] [12] [14] [15]
26Martín Peralta-Gil [20] [24]
27John Pick [18] [22]
28Seung Yon Rhee [18] [22] [23]
29Monica Riley [4] [7] [9] [10] [12] [14] [15]
30Pedro Romero [17]
31Milton H. Saier Jr. [12] [15]
32Alberto D. Santos-Zavaleta [24]
33Alexander Glennon Shearer [23] [24]
34Christophe Tissier [22] [23]
35Thomas C. Walk [23]
36Alfred Wang [18]
37Thomas Yan [21]
38Peifen Zhang [18] [19] [22] [23]
39Jingchun Zhu [13]

Copyright © Tue Nov 3 08:52:44 2009 by Michael Ley (ley@uni-trier.de)