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Thomas M. Oinn Vis

Tom Oinn

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*2009
21EEAndrew Gibson, Matthew Gamble, Katy Wolstencroft, Tom Oinn, Carole A. Goble, Khalid Belhajjame, Paolo Missier: The data playground: An intuitive workflow specification environment. Future Generation Comp. Syst. 25(4): 453-459 (2009)
2008
20EEKhalid Belhajjame, Katy Wolstencroft, Óscar Corcho, Tom Oinn, Franck Tanoh, Alan Williams, Carole A. Goble: Metadata Management in the Taverna Workflow System. CCGRID 2008: 651-656
19EEPeter Li, Juan I. Castrillo, Giles Velarde, Ingo Wassink, Stian Soiland-Reyes, Stuart Owen, David Withers, Tom Oinn, Matthew R. Pocock, Carole A. Goble, Stephen G. Oliver, Douglas B. Kell: Performing statistical analyses on quantitative data in Taverna workflows: An example using R and maxdBrowse to identify differentially-expressed genes from microarray data. BMC Bioinformatics 9: (2008)
18EEPeter Li, Tom Oinn, Stian Soiland, Douglas B. Kell: Automated manipulation of systems biology models using libSBML within Taverna workflows. Bioinformatics 24(2): 287-289 (2008)
17EEAnders Lanzén, Tom Oinn: The Taverna Interaction Service: enabling manual interaction in workflows. Bioinformatics 24(8): 1118-1120 (2008)
2007
16EESteve Pettifer, Katy Wolstencroft, Pinar Alper, Teresa K. Attwood, Alain Coletta, Carole A. Goble, Peter Li, Philip McDermott, James Marsh, Tom Oinn, James Sinnott, David Thorne: myGrid and UTOPIA: An Integrated Approach to Enacting and Visualising in Silico Experiments in the Life Sciences. DILS 2007: 59-70
15EEDaniele Turi, Paolo Missier, Carole A. Goble, David De Roure, Tom Oinn: Taverna Workflows: Syntax and Semantics. eScience 2007: 441-448
14EEAndrew Gibson, Matthew Gamble, Katy Wolstencroft, Tom Oinn, Carole A. Goble: The Data Playground: An Intuitive Workflow Specification Environment. eScience 2007: 59-68
2006
13EEThomas M. Oinn, R. Mark Greenwood, Matthew Addis, M. Nedim Alpdemir, Justin Ferris, Kevin Glover, Carole A. Goble, Antoon Goderis, Duncan Hull, Darren Marvin, Peter Li, Phillip W. Lord, Matthew R. Pocock, Martin Senger, Robert Stevens, Anil Wipat, Chris Wroe: Taverna: lessons in creating a workflow environment for the life sciences. Concurrency and Computation: Practice and Experience 18(10): 1067-1100 (2006)
12EEDuncan Hull, Katy Wolstencroft, Robert Stevens, Carole A. Goble, Matthew R. Pocock, Peter Li, Tom Oinn: Taverna: a tool for building and running workflows of services. Nucleic Acids Research 34(Web-Server-Issue): 729-732 (2006)
2005
11EEM. Nedim Alpdemir, Arijit Mukherjee, Norman W. Paton, Alvaro A. A. Fernandes, Paul Watson, Kevin Glover, Chris Greenhalgh, Thomas M. Oinn, Hannah J. Tipney: Contextualised Workflow Execution in MyGrid. EGC 2005: 444-453
10EEKaty Wolstencroft, Thomas M. Oinn, Carole A. Goble, Justin Ferris, Chris Wroe, Phillip W. Lord, Kevin Glover, Robert Stevens: Panoply of Utilities in Taverna. e-Science 2005: 156-162
2004
9EERobert D. Stevens, Hannah J. Tipney, Chris Wroe, Thomas M. Oinn, Martin Senger, Phillip W. Lord, Carole A. Goble, Andy Brass, M. Tassabehji: Exploring Williams-Beuren syndrome using myGrid. ISMB/ECCB (Supplement of Bioinformatics) 2004: 303-310
8EEThomas M. Oinn, Matthew Addis, Justin Ferris, Darren Marvin, R. Mark Greenwood, Carole A. Goble, Anil Wipat, Peter Li, Tim Carver: Delivering web service coordination capability to users. WWW (Alternate Track Papers & Posters) 2004: 438-439
7EEThomas M. Oinn, Matthew Addis, Justin Ferris, Darren Marvin, Martin Senger, R. Mark Greenwood, Tim Carver, Kevin Glover, Matthew R. Pocock, Anil Wipat, Peter Li: Taverna: a tool for the composition and enactment of bioinformatics workflows. Bioinformatics 20(17): 3045-3054 (2004)
2003
6EELuc Moreau, Simon Miles, Carole A. Goble, R. Mark Greenwood, Vijay Dialani, Matthew Addis, M. Nedim Alpdemir, Rich Cawley, David De Roure, Justin Ferris, Robert J. Gaizauskas, Kevin Glover, Chris Greenhalgh, Peter Li, Xiaojian Liu, Phillip W. Lord, Michael Luck, Darren Marvin, Thomas M. Oinn, Norman W. Paton, Steve Pettifer, Milena V. Radenkovic, Angus Roberts, Alan J. Robinson, Tom Rodden, Martin Senger, Nick Sharman, Robert Stevens, Brian Warboys, Anil Wipat, Chris Wroe: On the Use of Agents in BioInformatics Grid. CCGRID 2003: 653-668
5EEThomas M. Oinn: Talisman - rapid application development for the grid. ISMB (Supplement of Bioinformatics) 2003: 212-214
2002
4 Alexander Kanapin, Rolf Apweiler, Margaret Biswas, Wolfgang Fleischmann, Youla Karavidopoulou, Paul Kersey, Evgenia V. Kriventseva, Virginie Mittard, Nicola J. Mulder, Thomas M. Oinn, Isabelle Phan, Florence Servant, Evgeni M. Zdobnov: Interactive InterPro-based comparisons of proteins in whole genomes. Bioinformatics 18(2): 374-375 (2002)
2001
3 Rolf Apweiler, Terri K. Attwood, Amos Bairoch, Alex Bateman, Ewan Birney, Margaret Biswas, Philipp Bucher, Lorenzo Cerutti, Florence Corpet, Michael D. R. Croning, Richard Durbin, Laurent Falquet, Wolfgang Fleischmann, Jérôme Gouzy, Henning Hermjakob, Nicolas Hulo, Inge Jonassen, Daniel Kahn, Alexander Kanapin, Youla Karavidopoulou, Rodrigo Lopez, Beate Marx, Nicola J. Mulder, Thomas M. Oinn, Marco Pagni, Florence Servant, Christian J. A. Sigrist, Evgeni M. Zdobnov: The InterPro database, an integrated documentation resource for protein families, domains and functional sites. Nucleic Acids Research 29(1): 37-40 (2001)
2000
2 Margaret Biswas, Rolf Apweiler, Wolfgang Fleischmann, Alexander Kanapin, Youla Karavidopoulou, Paul Kersey, Evgenia V. Kriventseva, Virginie Mittard, Nicola J. Mulder, Thomas M. Oinn, Isabelle Phan, Evgeni M. Zdobnov: Proteome Analysis: Application of InterPro and CluSTr for the Functional Classification of Proteins in Whole Genomes. German Conference on Bioinformatics 2000: 149-158
1 Rolf Apweiler, Terri K. Attwood, Amos Bairoch, Alex Bateman, Ewan Birney, Margaret Biswas, Philipp Bucher, Lorenzo Cerutti, Florence Corpet, Michael D. R. Croning, Richard Durbin, Laurent Falquet, Wolfgang Fleischmann, Jérôme Gouzy, Henning Hermjakob, Nicolas Hulo, Inge Jonassen, Daniel Kahn, Alexander Kanapin, Youla Karavidopoulou, Rodrigo Lopez, Beate Marx, Nicola J. Mulder, Thomas M. Oinn, Marco Pagni, Florence Servant, Christian J. A. Sigrist, Evgeni M. Zdobnov: InterPro-an integrated documentation resource for protein families, domains and functional sites. Bioinformatics 16(12): 1145-1150 (2000)

Coauthor Index

1Matthew Addis [6] [7] [8] [13]
2M. Nedim Alpdemir [6] [11] [13]
3Pinar Alper [16]
4Rolf Apweiler [1] [2] [3] [4]
5Terri K. Attwood (Teresa K. Attwood) [1] [3] [16]
6Amos Bairoch [1] [3]
7Alex Bateman [1] [3]
8Khalid Belhajjame [20] [21]
9Ewan Birney [1] [3]
10Margaret Biswas [1] [2] [3] [4]
11Andy Brass [9]
12Philipp Bucher [1] [3]
13Tim J. Carver (Tim Carver) [7] [8]
14Juan I. Castrillo [19]
15Rich Cawley [6]
16Lorenzo Cerutti [1] [3]
17Alain Coletta [16]
18Óscar Corcho [20]
19Florence Corpet [1] [3]
20Michael D. R. Croning [1] [3]
21Vijay Dialani [6]
22Richard Durbin [1] [3]
23Laurent Falquet [1] [3]
24Alvaro A. A. Fernandes [11]
25Justin Ferris [6] [7] [8] [10] [13]
26Wolfgang Fleischmann [1] [2] [3] [4]
27Robert J. Gaizauskas [6]
28Matthew Gamble [14] [21]
29Andrew Gibson [14] [21]
30Kevin Glover [6] [7] [10] [11] [13]
31Carole A. Goble [6] [8] [9] [10] [12] [13] [14] [15] [16] [19] [20] [21]
32Antoon Goderis [13]
33Jérôme Gouzy [1] [3]
34Chris Greenhalgh [6] [11]
35R. Mark Greenwood [6] [7] [8] [13]
36Henning Hermjakob [1] [3]
37Duncan Hull [12] [13]
38Nicolas Hulo [1] [3]
39Inge Jonassen [1] [3]
40Daniel Kahn [1] [3]
41Alexander Kanapin [1] [2] [3] [4]
42Youla Karavidopoulou [1] [2] [3] [4]
43Douglas B. Kell [18] [19]
44Paul Kersey [2] [4]
45Evgenia V. Kriventseva [2] [4]
46Anders Lanzén [17]
47Peter Li [6] [7] [8] [12] [13] [16] [18] [19]
48Xiaojian Liu [6]
49Rodrigo Lopez [1] [3]
50Phillip W. Lord [6] [9] [10] [13]
51Michael Luck [6]
52James Marsh [16]
53Darren Marvin [6] [7] [8] [13]
54Beate Marx [1] [3]
55Philip McDermott [16]
56Simon Miles [6]
57Paolo Missier [15] [21]
58Virginie Mittard [2] [4]
59Luc Moreau [6]
60Arijit Mukherjee [11]
61Nicola J. Mulder [1] [2] [3] [4]
62Stephen G. Oliver [19]
63Stuart Owen [19]
64Marco Pagni [1] [3]
65Norman W. Paton [6] [11]
66Steve Pettifer [6] [16]
67Isabelle Phan (I. Q. H. Phan) [2] [4]
68Matthew R. Pocock [7] [12] [13] [19]
69Milena Radenkovic (Milena V. Radenkovic) [6]
70Angus Roberts [6]
71Alan J. Robinson [6]
72Tom Rodden [6]
73David De Roure [6] [15]
74Martin Senger [6] [7] [9] [13]
75Florence Servant [1] [3] [4]
76Nick Sharman [6]
77Christian J. A. Sigrist [1] [3]
78James Sinnott [16]
79Stian Soiland-Reyes (Stian Soiland) [18] [19]
80Robert Stevens (Robert D. Stevens) [6] [9] [10] [12] [13]
81Franck Tanoh [20]
82M. Tassabehji [9]
83David Thorne [16]
84Hannah J. Tipney [9] [11]
85Daniele Turi [15]
86Giles Velarde [19]
87Brian Warboys [6]
88Ingo Wassink [19]
89Paul Watson [11]
90Alan Williams [20]
91Anil Wipat [6] [7] [8] [13]
92David Withers [19]
93Katy Wolstencroft (Katherine Wolstencroft) [10] [12] [14] [16] [20] [21]
94Chris Wroe [6] [9] [10] [13]
95Evgeni M. Zdobnov [1] [2] [3] [4]

Colors in the list of coauthors

Copyright © Tue Nov 3 08:52:44 2009 by Michael Ley (ley@uni-trier.de)