Luciano Milanesi Vis

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56EEDaniele D'Agostino, Andrea Clematis, Ivan Merelli, Paolo Cozzi, Luciano Milanesi: Parallel Decomposition of 3D Surfaces in Images of Local Descriptors for Molecular Screening. PDP 2009: 261-267
55EERoberto Barbera, Giacinto Donvito, Alberto Falzone, Giuseppe La Rocca, Luciano Milanesi, Giorgio Pietro Maggi, Saverio Vicario: The GENIUS Grid Portal and robot certificates: a new tool for e-Science. BMC Bioinformatics 10(S-6): (2009)
54EERichard C. van der Wath, Elizabeth van der Wath, Antonio Carapelli, Francesco Nardi, Francesco Frati, Luciano Milanesi, Pietro Liò: Bayesian Phylogeny on Grid. BIRD 2008: 404-416
53EEAntonella Galizia, Federica Viti, Alessandro Orro, Daniele D'Agostino, Ivan Merelli, Luciano Milanesi, Andrea Clematis: TMAinspect, an EGEE Framework for Tissue MicroArray Image Handling. CCGRID 2008: 741-746
52EEPaolo Cozzi, Ivan Merelli, Luciano Milanesi: A Visualization ToolKit Based Application for Representing Macromolecular Surfaces. CIBB 2008: 284-292
51EEAntonella Galizia, Daniele D'Agostino, Andrea Clematis, Federica Viti, Alessandro Orro, Ivan Merelli, Luciano Milanesi: Enabling Parallel TMA Image Analysis in a Grid Environment. CISIS 2008: 394-399
50EEDaniele D'Agostino, Andrea Clematis, Ivan Merelli, Luciano Milanesi, Matteo Coloberti: A Grid Service based Parallel Molecular Surface Reconstruction System. PDP 2008: 455-462
49EEAlessandro Orro, Guia Guffanti, Erika Salvi, Fabio Macciardi, Luciano Milanesi: SNPLims: a data management system for genome wide association studies. BMC Bioinformatics 9(S-2): (2008)
48EEBarbara Lazzari, Andrea Caprera, Alberto Vecchietti, Ivan Merelli, Francesca Barale, Luciano Milanesi, Alessandra Stella, Carlo Pozzi: Version VI of the ESTree db: an improved tool for peach transcriptome analysis. BMC Bioinformatics 9(S-2): (2008)
47EEFederica Viti, Ivan Merelli, Andrea Caprera, Barbara Lazzari, Alessandra Stella, Luciano Milanesi: Ontology-based, Tissue MicroArray oriented, image centered tissue bank. BMC Bioinformatics 9(S-4): (2008)
46EEMirko Francesconi, Daniel Remondini, Nicola Neretti, John M. Sedivy, Leon N. Cooper, Ettore Verondini, Luciano Milanesi, Gastone C. Castellani: Reconstructing networks of pathways via significance analysis of their intersections. BMC Bioinformatics 9(S-4): (2008)
45EEIvan Merelli, Alessandro Orro, Daniele D'Agostino, Andrea Clematis, Luciano Milanesi: A parallel protein surface reconstruction system. IJBRA 4(3): 221-239 (2008)
44EEChanchal K. Mitra, Luciano Milanesi: An Unusal Distribution of 6-nt Sequences Near The Transcription Start Site. J. Integrative Bioinformatics 5(2): (2008)
43EERoberta Alfieri, Ivan Merelli, Ettore Mosca, Luciano Milanesi: The cell cycle DB: a systems biology approach to cell cycle analysis. Nucleic Acids Research 36(Database-Issue): 641-645 (2008)
42 Antonella Galizia, Federica Viti, Daniele D'Agostino, Ivan Merelli, Luciano Milanesi, Andrea Clematis: Experimenting Grid Protocols to Improve Privacy Preservation in Efficient Distributed Image Processing. PARCO 2007: 139-146
41 Daniele D'Agostino, Ivan Merelli, Andrea Clematis, Luciano Milanesi, Alessandro Orro: A Parallel Workflow for the Reconstruction of Molecular Surfaces. PARCO 2007: 147-154
40EEPaolo Romano, Ezio Bartocci, Guglielmo Bertolini, Flavio De Paoli, Domenico Marra, Giancarlo Mauri, Emanuela Merelli, Luciano Milanesi: Biowep: a workflow enactment portal for bioinformatics applications. BMC Bioinformatics 8(S-1): (2007)
39EEGabriele A. Trombetti, Raoul J. P. Bonnal, Ermanno Rizzi, Gianluca De Bellis, Luciano Milanesi: Data handling strategies for high throughput pyrosequencers. BMC Bioinformatics 8(S-1): (2007)
38EEBarbara Lazzari, Andrea Caprera, Cristian Cosentino, Alessandra Stella, Luciano Milanesi, Angelo Viotti: ESTuber db: an online database for Tuber borchii EST sequences. BMC Bioinformatics 8(S-1): (2007)
37EEPasqualina D'Ursi, Francesca Marino, Andrea Caprera, Luciano Milanesi, Elena M. Faioni, Ermanna Rovida: ProCMD: a database and 3D web resource for protein C mutants. BMC Bioinformatics 8(S-1): (2007)
36EEDietrich Rebholz-Schuhmann, Graham Cameron, Dominic Clark, Erik M. van Mulligen, Jean-Louis Coatrieux, Eva del Hoyo-Barbolla, Fernando Martín-Sánchez, Luciano Milanesi, Ivan Porro, Francesco Beltrame, Ioannis G. Tollis, Johan van der Lei: SYMBIOmatics: Synergies in Medical Informatics and Bioinformatics - exploring current scientific literature for emerging topics. BMC Bioinformatics 8(S-1): (2007)
35EEEmanuela Merelli, Giuliano Armano, Nicola Cannata, Flavio Corradini, Mark d'Inverno, Andreas Doms, Phillip W. Lord, Andrew Martin, Luciano Milanesi, Steffen Möller, Michael Schroeder, Michael Luck: Agents in bioinformatics, computational and systems biology. Briefings in Bioinformatics 8(1): 45-59 (2007)
34EEDaniel Remondini, Nicola Neretti, Claudio Franceschi, Paolo Tieri, John M. Sedivy, Luciano Milanesi, Gastone C. Castellani: Networks from Gene Expression Time Series: Characterization of Correlation Patterns. I. J. Bifurcation and Chaos 17(7): 2477-2483 (2007)
33EEJean-Yves Bansard, Dietrich Rebholz-Schuhmann, Graham Cameron, Dominic Clark, Erik M. van Mulligen, Francesco Beltrame, Eva del Hoyo-Barbolla, Fernando Martín-Sánchez, Luciano Milanesi, Ioannis G. Tollis, Johan van der Lei, Jean-Louis Coatrieux: Medical Informatics and Bioinformatics: A Bibliometric Study. IEEE Transactions on Information Technology in Biomedicine 11(3): 237-243 (2007)
32EEFedor Kolpakov, Vladimir Poroikov, Ruslan N. Sharipov, Yury V. Kondrakhin, Alexey Zakharov, Alexey Lagunin, Luciano Milanesi, Alexander E. Kel: CYCLONET - an integrated database on cell cycle regulation and carcinogenesis. Nucleic Acids Research 35(Database-Issue): 550-556 (2007)
31EENicolas Jacq, Vincent Breton, Hsin-Yen Chen, Li-Yung Ho, Martin Hofmann, Hurng-Chun Lee, Yannick Legré, Simon C. Lin, Astrid Maaß, Emmanuel Medernach, Ivan Merelli, Luciano Milanesi, Giulio Rastelli, Matthieu Reichstadt, Jean Salzemann, Horst Schwichtenberg, Mahendrakar Sridhar, Vinod Kasam, Ying-Ta Wu, Marc Zimmermann: Grid-Enabled High Throughput Virtual Screening. GCCB 2006: 45-59
30EENicolas Jacq, Vincent Breton, Hsin-Yen Chen, Li-Yung Ho, Martin Hofmann, Hurng-Chun Lee, Yannick Legré, Simon C. Lin, Astrid Maaß, Emmanuel Medernach, Ivan Merelli, Luciano Milanesi, Giulio Rastelli, Matthieu Reichstadt, Jean Salzemann, Horst Schwichtenberg, Mahendrakar Sridhar, Vinod Kasam, Ying-Ta Wu, Marc Zimmermann: Large Scale In Silico Screening on Grid Infrastructures CoRR abs/cs/0611084: (2006)
29 Alessandro Orro, Luciano Milanesi: An Agent System for Automatic Workflows Composition in Grid Environments. ITSSA 1(1): 59-66 (2006)
28EEPaolo Romano, Guglielmo Bertolini, Flavio De Paoli, M. Fattore, Domenico Marra, Giancarlo Mauri, Emanuela Merelli, Ivan Porro, Silvia Scaglione, Luciano Milanesi: Network integration of data and analysis of oncology interest. J. Integrative Bioinformatics 3(1): (2006)
27EEGabriele A. Trombetti, Ivan Merelli, Luciano Milanesi: High performance cDNA sequence analysis using grid technology. J. Parallel Distrib. Comput. 66(12): 1482-1488 (2006)
26EEIvan Merelli, Luciano Milanesi, Daniele D'Agostino, Andrea Clematis, Marco Vanneschi, Marco Danelutto: Using Parallel Isosurface Extraction in Superficial Molecular Modeling. DFMA 2005: 288-294
25EEIgor B. Rogozin, B. A. Malyarchuk, Youri I. Pavlov, Luciano Milanesi: From Context-Dependence of Mutations to Molecular Mechanisms of Mutagenesis. Pacific Symposium on Biocomputing 2005
24EEGiuliano Armano, Gianmaria Mancosu, Luciano Milanesi, Alessandro Orro, Massimiliano Saba, Eloisa Vargiu: A Hybrid Genetic-Neural System for Predicting Protein Secondary Structure. BMC Bioinformatics 6(S-4): (2005)
23EEBarbara Lazzari, Andrea Caprera, Alberto Vecchietti, Alessandra Stella, Luciano Milanesi, Carlo Pozzi: ESTree db: a Tool for Peach Functional Genomics. BMC Bioinformatics 6(S-4): (2005)
22EEIvan Merelli, Giulia Morra, Daniele D'Agostino, Andrea Clematis, Luciano Milanesi: High performance workflow implementation for protein surface characterization using grid technology. BMC Bioinformatics 6(S-4): (2005)
21EEPasqualina D'Ursi, Erika Salvi, Paola Fossa, Luciano Milanesi, Ermanna Rovida: Modelling the interaction of steroid receptors with endocrine disrupting chemicals. BMC Bioinformatics 6(S-4): (2005)
20EEManuela Helmer-Citterich, Rita Casadio, Alessandro Guffanti, Giancarlo Mauri, Luciano Milanesi, Graziano Pesole, Giorgio Valle, Cecilia Saccone: Overview of BITS2005, the Second Annual Meeting of the Italian Bioinformatics Society. BMC Bioinformatics 6(S-4): (2005)
19EELuciano Milanesi, Mauro Petrillo, Leandra Sepe, Angelo Boccia, Nunzio D'Agostino, Myriam Passamano, Salvatore Di Nardo, Gianluca Tasco, Rita Casadio, Giovanni Paolella: Systematic analysis of human kinase genes: a large number of genes and alternative splicing events result in functional and structural diversity. BMC Bioinformatics 6(S-4): (2005)
18EEPaolo Romano, Domenico Marra, Luciano Milanesi: Web services and workflow management for biological resources. BMC Bioinformatics 6(S-4): (2005)
17EEGiuliano Armano, Luciano Milanesi, Alessandro Orro: Using Secondary Structure Information to Perform Multiple Alignment. T. Comp. Sys. Biology: 78-88 (2005)
16 Igor B. Rogozin, Vladimir N. Babenko, Luciano Milanesi, Youri I. Pavlov: Computational analysis of mutation spectra. Briefings in Bioinformatics 4(3): 210-227 (2003)
15 Vadim P. Valuev, Dmitry A. Afonnikov, Mikhail P. Ponomarenko, Luciano Milanesi, Nikolay A. Kolchanov: ASPD (Artificially Selected Proteins/Peptides Database): a database of proteins and peptides evolved in vitro. Nucleic Acids Research 30(1): 200-202 (2002)
14 Igor B. Rogozin, Alexey V. Kochetov, Fyodor A. Kondrashov, Eugene V. Koonin, Luciano Milanesi: Presence of ATG triplets in 5' untranslated regions of eukaryotic cDNAs correlates with a `weak' context of the start codon. Bioinformatics 17(10): 890-900 (2001)
13 Igor B. Rogozin, V. I. Mayorov, M. V. Lavrentieva, Luciano Milanesi, L. R. Adkison: Prediction and Phylogenetic Analysis of Mammalian Short Interspersed Elements (SINEs). Briefings in Bioinformatics 1(3): 260-274 (2000)
12 Luciano Milanesi, D. D'Angelo, Igor B. Rogozin: GeneBuilder: interactive in silico prediction of gene structure. Bioinformatics 15(7): 612-621 (1999)
11 Nikolay A. Kolchanov, Mikhail P. Ponomarenko, Anatoly S. Frolov, Elena A. Ananko, F. A. Kolpakov, Elena V. Ignatieva, Olga A. Podkolodnaya, T. N. Goryachkovskaya, Irina L. Stepanenko, Tatyana I. Merkulova, V. V. Babenko, Y. V. Ponomarenko, Alexey V. Kochetov, Nikolay L. Podkolodny, Denis G. Vorobiev, Sergey V. Lavryushev, Dmitry A. Grigorovich, Y. V. Kondrakhin, Luciano Milanesi, Edgar Wingender, Victor V. Solovyev, G. Christian Overton: Integrated databases and computer systems for studying eukaryotic gene expression. Bioinformatics 15(7): 669-686 (1999)
10 Nikolay A. Kolchanov, Mikhail P. Ponomarenko, Alexander E. Kel, Y. V. Kondrakhin, Anatoly S. Frolov, F. A. Kolpakov, T. N. Goryachkovskaya, O. V. Kel, Elena A. Ananko, Elena V. Ignatieva, Olga A. Podkolodnaya, Vladimir N. Babenko, Irina L. Stepanenko, Aida G. Romashchenko, Tatyana I. Merkulova, Denis G. Vorobiev, Sergey V. Lavryushev, Y. V. Ponomarenko, Alexey V. Kochetov, G. B. Kolesov, Victor V. Solovyev, Luciano Milanesi, Nikolay L. Podkolodny, Edgar Wingender, T. Heinemeyer: GenExpress: A Computer System for Description, Analysis and Recognition of Regulatory Sequences in Eukaryotic Genome. ISMB 1998: 95-104
9 Maria Giuseppina Campi, Paolo Romano, Luciano Milanesi, Domenico Marra, Maria Assunta Manniello, Beatrice Iannotta, Gabriella Rondanina, Elena Grasso, Tiziana Ruzzon, Leonardo Santi: Molecular Probe Data Base (MPDB). Nucleic Acids Research 26(1): 145-147 (1998)
8 Y. V. Kondrakhin, F. A. Kolpakov, Alexander E. Kel, Nikolay A. Kolchanov, Luciano Milanesi: Computer Analysis and Recognition of the Transcription Regulatory Elements in Eukaryotic Genomes. German Conference on Bioinformatics 1996: 247-250
7 Igor B. Rogozin, Luciano Milanesi, Nikolay A. Kolchanov: Gene structure prediction using information on homologous protein sequence. Computer Applications in the Biosciences 12(3): 161-170 (1996)
6 Luciano Milanesi, M. Muselli, P. Arrigo: Hamming-Clustering method for signals prediction in 5' and 3' regions of eukaryotic genes. Computer Applications in the Biosciences 12(5): 399-404 (1996)
5 Alexander E. Kel, Y. V. Kondrakhin, Ph. A. Kolpakov, O. V. Kel, Aida G. Romashchenko, Edgar Wingender, Luciano Milanesi, Nikolay A. Kolchanov: Computer Tool FUNSITE for Analysis of Eukaryotic Regulatory Genomic Sequences. ISMB 1995: 197-205
4 Y. V. Kondrakhin, Alexander E. Kel, Nikolay A. Kolchanov, Aida G. Romashchenko, Luciano Milanesi: Eukaryotic promoter recognition by binding sites for transcription factors. Computer Applications in the Biosciences 11(5): 477-488 (1995)
3 Victor B. Strelets, Andrey A. Ptitsyn, Luciano Milanesi, Hwa A. Lim: Data bank homology search algorithm with linear computation complexity. Computer Applications in the Biosciences 10(3): 319-322 (1994)
2 Alexander E. Kel, Mikhail P. Ponomarenko, E. A. Likhachev, Yuri L. Orlov, I. V. Ischenko, Luciano Milanesi, Nikolay A. Kolchanov: SITEVIDEO: a computer system for functional site analysis and recognition. Investigation of the human splice sites. Computer Applications in the Biosciences 9(6): 617-627 (1993)
1 Victor B. Strelets, Ilya N. Shindyalov, Nikolay A. Kolchanov, Luciano Milanesi: Fast, statistically based alignment of amino acid sequences on the base of diagonal fragments of DOT-matrices. Computer Applications in the Biosciences 8(6): 529-534 (1992)

Coauthor Index

1L. R. Adkison [13]
2Dmitry A. Afonnikov [15]
3Roberta Alfieri [43]
4Elena A. Ananko [10] [11]
5Giuliano Armano [17] [24] [35]
6P. Arrigo [6]
7V. V. Babenko [11]
8Vladimir N. Babenko [10] [16]
9Jean-Yves Bansard [33]
10Francesca Barale [48]
11Roberto Barbera [55]
12Ezio Bartocci [40]
13Gianluca De Bellis [39]
14Francesco Beltrame [33] [36]
15Guglielmo Bertolini [28] [40]
16Angelo Boccia [19]
17Raoul J. P. Bonnal [39]
18Vincent Breton [30] [31]
19Graham Cameron [33] [36]
20Maria Giuseppina Campi [9]
21Nicola Cannata [35]
22Andrea Caprera [23] [37] [38] [47] [48]
23Antonio Carapelli [54]
24Rita Casadio [19] [20]
25Gastone C. Castellani [34] [46]
26Hsin-Yen Chen [30] [31]
27Dominic Clark [33] [36]
28Andrea Clematis [22] [26] [41] [42] [45] [50] [51] [53] [56]
29Jean-Louis Coatrieux [33] [36]
30Matteo Coloberti [50]
31Leon N. Cooper [46]
32Flavio Corradini [35]
33Cristian Cosentino [38]
34Paolo Cozzi [52] [56]
35Daniele D'Agostino [22] [26] [41] [42] [45] [50] [51] [53] [56]
36Nunzio D'Agostino [19]
37D. D'Angelo [12]
38Pasqualina D'Ursi [21] [37]
39Marco Danelutto [26]
40Andreas Doms [35]
41Giacinto Donvito [55]
42Elena M. Faioni [37]
43Alberto Falzone [55]
44M. Fattore [28]
45Paola Fossa [21]
46Claudio Franceschi [34]
47Mirko Francesconi [46]
48Francesco Frati [54]
49Anatoly S. Frolov [10] [11]
50Antonella Galizia [42] [51] [53]
51T. N. Goryachkovskaya [10] [11]
52Elena Grasso [9]
53Dmitry A. Grigorovich [11]
54Alessandro Guffanti [20]
55Guia Guffanti [49]
56T. Heinemeyer [10]
57Manuela Helmer-Citterich [20]
58Li-Yung Ho [30] [31]
59Martin Hofmann [30] [31]
60Eva del Hoyo-Barbolla [33] [36]
61Beatrice Iannotta [9]
62Elena V. Ignatieva [10] [11]
63I. V. Ischenko [2]
64Nicolas Jacq [30] [31]
65Vinod Kasam [30] [31]
66Alexander E. Kel [2] [4] [5] [8] [10] [32]
67O. V. Kel [5] [10]
68Alexey V. Kochetov [10] [11] [14]
69Nikolay A. Kolchanov [1] [2] [4] [5] [7] [8] [10] [11] [15]
70G. B. Kolesov [10]
71F. A. Kolpakov [8] [10] [11]
72Fedor Kolpakov [32]
73Ph. A. Kolpakov [5]
74Yury V. Kondrakhin (Y. V. Kondrakhin) [4] [5] [8] [10] [11] [32]
75Fyodor A. Kondrashov [14]
76Eugene V. Koonin [14]
77Alexey Lagunin [32]
78M. V. Lavrentieva [13]
79Sergey V. Lavryushev [10] [11]
80Barbara Lazzari [23] [38] [47] [48]
81Hurng-Chun Lee [30] [31]
82Yannick Legré [30] [31]
83Johan van der Lei [33] [36]
84E. A. Likhachev [2]
85Hwa A. Lim [3]
86Simon C. Lin [30] [31]
87Pietro Liò [54]
88Phillip W. Lord [35]
89Michael Luck [35]
90Astrid Maaß [30] [31]
91Fabio Macciardi [49]
92Giorgio Pietro Maggi [55]
93B. A. Malyarchuk [25]
94Gianmaria Mancosu [24]
95Maria Assunta Manniello [9]
96Francesca Marino [37]
97Domenico Marra [9] [18] [28] [40]
98Andrew Martin [35]
99Fernando Martín-Sánchez [33] [36]
100Giancarlo Mauri [20] [28] [40]
101V. I. Mayorov [13]
102Emmanuel Medernach [30] [31]
103Emanuela Merelli [28] [35] [40]
104Ivan Merelli [22] [26] [27] [30] [31] [41] [42] [43] [45] [47] [48] [50] [51] [52] [53] [56]
105Tatyana I. Merkulova [10] [11]
106Chanchal K. Mitra [44]
107Steffen Möller [35]
108Giulia Morra [22]
109Ettore Mosca [43]
110Erik M. van Mulligen [33] [36]
111M. Muselli [6]
112Francesco Nardi [54]
113Salvatore Di Nardo [19]
114Nicola Neretti [34] [46]
115Yuri L. Orlov [2]
116Alessandro Orro [17] [24] [29] [41] [45] [49] [51] [53]
117G. Christian Overton [11]
118Giovanni Paolella [19]
119Flavio De Paoli [28] [40]
120Myriam Passamano [19]
121Youri I. Pavlov [16] [25]
122Graziano Pesole [20]
123Mauro Petrillo [19]
124Olga A. Podkolodnaya [10] [11]
125Nikolay L. Podkolodny [10] [11]
126Mikhail P. Ponomarenko [2] [10] [11] [15]
127Y. V. Ponomarenko [10] [11]
128Vladimir Poroikov [32]
129Ivan Porro [28] [36]
130Carlo Pozzi [23] [48]
131Andrey A. Ptitsyn [3]
132Giulio Rastelli [30] [31]
133Dietrich Rebholz-Schuhmann [33] [36]
134Matthieu Reichstadt [30] [31]
135Daniel Remondini [34] [46]
136Ermanno Rizzi [39]
137Giuseppe La Rocca [55]
138Igor B. Rogozin [7] [12] [13] [14] [16] [25]
139Paolo Romano [9] [18] [28] [40]
140Aida G. Romashchenko [4] [5] [10]
141Gabriella Rondanina [9]
142Ermanna Rovida [21] [37]
143Tiziana Ruzzon [9]
144Massimiliano Saba [24]
145Cecilia Saccone [20]
146Erika Salvi [21] [49]
147Jean Salzemann [30] [31]
148Leonardo Santi [9]
149Silvia Scaglione [28]
150Michael Schroeder [35]
151Horst Schwichtenberg [30] [31]
152John M. Sedivy [34] [46]
153Leandra Sepe [19]
154Ruslan N. Sharipov (Ruslan Sharipov Nilyevich) [32]
155Ilya N. Shindyalov [1]
156Victor V. Solovyev [10] [11]
157Mahendrakar Sridhar [30] [31]
158Alessandra Stella [23] [38] [47] [48]
159Irina L. Stepanenko [10] [11]
160Victor B. Strelets [1] [3]
161Gianluca Tasco [19]
162Paolo Tieri [34]
163Ioannis G. Tollis [33] [36]
164Gabriele A. Trombetti [27] [39]
165Giorgio Valle [20]
166Vadim P. Valuev [15]
167Marco Vanneschi [26]
168Eloisa Vargiu [24]
169Alberto Vecchietti [23] [48]
170Ettore Verondini [46]
171Saverio Vicario [55]
172Angelo Viotti [38]
173Federica Viti [42] [47] [51] [53]
174Denis G. Vorobiev [10] [11]
175Elizabeth van der Wath [54]
176Richard C. van der Wath [54]
177Edgar Wingender [5] [10] [11]
178Ying-Ta Wu [30] [31]
179Alexey Zakharov [32]
180Marc Zimmermann [30] [31]
181Mark d'Inverno [35]

Colors in the list of coauthors

Copyright © Tue Nov 3 08:52:44 2009 by Michael Ley (ley@uni-trier.de)