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Hans-Peter Lenhof Vis

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*2009
45EEErnst Althaus, Gunnar W. Klau, Oliver Kohlbacher, Hans-Peter Lenhof, Knut Reinert: Integer Linear Programming in Computational Biology. Efficient Algorithms 2009: 199-218
44EEJan Fuhrmann, Alexander Rurainski, Hans-Peter Lenhof, Dirk Neumann: A new method for the gradient-based optimization of molecular complexes. Journal of Computational Chemistry 30(9): 1371-1378 (2009)
43EEAlexander Rurainski, Andreas Hildebrandt, Hans-Peter Lenhof: A consensus line search algorithm for molecular potential energy functions. Journal of Computational Chemistry 30(9): 1499-1509 (2009)
2008
42EEAndreas Keller, Christina Backes, Maher Al-Awadhi, Andreas Gerasch, Jan Küntzer, Oliver Kohlbacher, Michael Kaufmann, Hans-Peter Lenhof: GeneTrailExpress: a web-based pipeline for the statistical evaluation of microarray experiments. BMC Bioinformatics 9: (2008)
2007
41EEJan Küntzer, Christina Backes, Torsten Blum, Andreas Gerasch, Michael Kaufmann, Oliver Kohlbacher, Hans-Peter Lenhof: BNDB - The Biochemical Network Database. BMC Bioinformatics 8: (2007)
40EEAndreas Keller, Christina Backes, Hans-Peter Lenhof: Computation of significance scores of unweighted Gene Set Enrichment Analyses. BMC Bioinformatics 8: (2007)
39EEAndreas Hildebrandt, Ralf Blossey, Sergej Rjasanow, Oliver Kohlbacher, Hans-Peter Lenhof: Electrostatic potentials of proteins in water: a structured continuum approach. Bioinformatics 23(2): 99-103 (2007)
38EEChristina Backes, Andreas Keller, Jan Küntzer, Benny Kneissl, Nicole Comtesse, Yasser A. Elnakady, Rolf Müller, Eckart Meese, Hans-Peter Lenhof: GeneTrail - advanced gene set enrichment analysis. Nucleic Acids Research 35(Web-Server-Issue): 186-192 (2007)
37EEAndreas Keller, Nicole Comtesse, Nicole Ludwig, Eckart Meese, Hans-Peter Lenhof: SePaCS - a web-based application for classification of seroreactivity profiles. Nucleic Acids Research 35(Web-Server-Issue): 683-687 (2007)
2006
36EEAndreas Moll, Andreas Hildebrandt, Hans-Peter Lenhof, Oliver Kohlbacher: BALLView: a tool for research and education in molecular modeling. Bioinformatics 22(3): 365-366 (2006)
35EEJan Küntzer, Torsten Blum, Andreas Gerasch, Christina Backes, Andreas Hildebrandt, Michael Kaufmann, Oliver Kohlbacher, Hans-Peter Lenhof: BN++ - A Biological Information System. J. Integrative Bioinformatics 3(2): (2006)
34EEErnst Althaus, Alberto Caprara, Hans-Peter Lenhof, Knut Reinert: A branch-and-cut algorithm for multiple sequence alignment. Math. Program. 105(2-3): 387-425 (2006)
2005
33EEHansjörg Toll, Peter Berger, Andreas Hofmann, Andreas Hildebrandt, Herbert Oberacher, Hans-Peter Lenhof, Christian G. Huber: Glycosylation Patterns of Proteins Studied by Liquid Chromatography-Mass Spectrometry and Bioinformatic Tools. Computational Proteomics 2005
32EEChristina Backes, Jan Küntzer, Hans-Peter Lenhof, Nicole Comtesse, Eckart Meese: GraBCas: a bioinformatics tool for score-based prediction of Caspase- and Granzyme B-cleavage sites in protein sequences. Nucleic Acids Research 33(Web-Server-Issue): 208-213 (2005)
2004
31EERalf Hofestädt, Hans-Peter Lenhof: Molekulare Bioinformatik. it - Information Technology 46(1): 3-4 (2004)
2002
30 Marite Sirava, T. Schäfer, Markus Eiglsperger, Michael Kaufmann, Oliver Kohlbacher, Erich Bornberg-Bauer, Hans-Peter Lenhof: BioMiner - modeling, analyzing, and visualizing biochemical pathways and networks. ECCB 2002: 219-230
29 Ernst Althaus, Alberto Caprara, Hans-Peter Lenhof, Knut Reinert: Multiple sequence alignment with arbitrary gap costs: Computing an optimal solution using polyhedral combinatorics. ECCB 2002: 4-16
28 Ernst Althaus, Oliver Kohlbacher, Hans-Peter Lenhof, Peter Müller: A Combinatorial Approach to Protein Docking with Flexible Side Chains. Journal of Computational Biology 9(4): 597-612 (2002)
2001
27EEOliver Kohlbacher, Andreas Burchardt, Andreas Moll, Andreas Hildebrandt, Peter Bayer, Hans-Peter Lenhof: A NMR-spectra-based scoring function for protein docking. RECOMB 2001: 184-192
2000
26EEErnst Althaus, Oliver Kohlbacher, Hans-Peter Lenhof, Peter Müller: A combinatorial approach to protein docking with flexible side-chains. RECOMB 2000: 15-24
25EENicolas Boghossian, Oliver Kohlbacher, Hans-Peter Lenhof: Rapid Software Prototyping in Molecular Modeling Using the Biochemical Algorithms Library (BALL). ACM Journal of Experimental Algorithmics 5: 16 (2000)
24 Oliver Kohlbacher, Hans-Peter Lenhof: BALL-rapid software prototyping in computational molecular biology. Bioinformatics 16(9): 815-824 (2000)
23 John D. Kececioglu, Hans-Peter Lenhof, Kurt Mehlhorn, Petra Mutzel, Knut Reinert, Martin Vingron: A polyhedral approach to sequence alignment problems. Discrete Applied Mathematics 104(1-3): 143-186 (2000)
22EEBernd Jung, Hans-Peter Lenhof, Peter Müller, Christine Rüb: Simulating synthetic polymer chains in parallel. Future Generation Comp. Syst. 16(5): 513-522 (2000)
1999
21EENicolas Boghossian, Oliver Kohlbacher, Hans-Peter Lenhof: BALL: Biochemical Algorithms Library. Algorithm Engineering 1999: 331-345
20 Oliver Kohlbacher, Hans-Peter Lenhof: Rapid Software Prototyping in Computational Molecular Biology. German Conference on Bioinformatics 1999: 81-92
19 Bernd Jung, Hans-Peter Lenhof, Peter Müller, Christine Rüb: Simulating Synthetic Polymer Chains in Parallel. HPCN Europe 1999: 13-22
18EEStefan Burkhardt, Andreas Crauser, Paolo Ferragina, Hans-Peter Lenhof, Eric Rivals, Martin Vingron: q-gram based database searching using a suffix array (QUASAR). RECOMB 1999: 77-83
17 Hans-Peter Lenhof, Burkhard Morgenstern, Knut Reinert: An exact solution for the segment-to-segment multiple sequence alignment problem. Bioinformatics 15(3): 203-210 (1999)
1998
16 Knut Reinert, Hans-Peter Lenhof, Burkhard Morgenstern: An exact solution for the Segment-to-Segment multiple sequence alignment problem. German Conference on Bioinformatics 1998
15EEHans-Peter Lenhof, Knut Reinert, Martin Vingron: A polyhedral approach to RNA sequence structure alignment. RECOMB 1998: 153-162
14 Hans-Peter Lenhof, Knut Reinert, Martin Vingron: A Polyhedral Approach to RNA Sequence Structure Alignment. Journal of Computational Biology 5(3): 517-530 (1998)
1997
13 Bernd Jung, Hans-Peter Lenhof, Peter Müller, Christine Rüb: Parallel MD-Simulations of Synthetic Polymers. PPSC 1997
12EEHans-Peter Lenhof: New contact measures for the protein docking problem. RECOMB 1997: 182-191
11EEKnut Reinert, Hans-Peter Lenhof, Petra Mutzel, Kurt Mehlhorn, John D. Kececioglu: A branch-and-cut algorithm for multiple sequence alignment. RECOMB 1997: 241-250
1995
10 Hans-Peter Lenhof, Michiel H. M. Smid: Maintaining the Visibility Map of Spheres While Moving the Viewpoint on a Circle at Infinity. Algorithmica 13(3): 301-312 (1995)
9 Hans-Peter Lenhof, Michiel H. M. Smid: Sequential and parallel algorithms for the k closest pairs problem. Int. J. Comput. Geometry Appl. 5(3): 273-288 (1995)
8 Amitava Datta, Hans-Peter Lenhof, Christian Schwarz, Michiel H. M. Smid: Static and Dynamic Algorithms for k-Point Clustering Problems. J. Algorithms 19(3): 474-503 (1995)
1994
7EEHans-Peter Lenhof, Michiel H. M. Smid: An Animation of a Fixed-Radius All-Nearest-Neighbors Algorithm. Symposium on Computational Geometry 1994: 387
6 Hans-Peter Lenhof, Michiel H. M. Smid: Using Persistent Data Structures for Adding Range Restrictions to Searching Problems. ITA 28(1): 25-49 (1994)
1993
5 Amitava Datta, Hans-Peter Lenhof, Christian Schwarz, Michiel H. M. Smid: Static and Dynamic Algorithms for k-Point Clustering Problems. WADS 1993: 265-276
4 Hans-Peter Lenhof, Michiel H. M. Smid: An optimal construction method for generalized convex layers. Int. J. Comput. Geometry Appl. 3(3): 245-267 (1993)
1992
3 Hans-Peter Lenhof, Michiel H. M. Smid: Enumerating the k Closest Pairs Optimally FOCS 1992: 380-386
2EEHans-Peter Lenhof, Michiel H. M. Smid: Maintaining the Visibility Map of Spheres while Moving the Viewpoint on a Circle at Infinity. SWAT 1992: 388-398
1991
1 Hans-Peter Lenhof, Michiel H. M. Smid: An Optimal Construction Method for Generalized Convex Layers. ISA 1991: 349-363

Coauthor Index

1Maher Al-Awadhi [42]
2Ernst Althaus [26] [28] [29] [34] [45]
3Christina Backes [32] [35] [38] [40] [41] [42]
4Peter Bayer [27]
5Peter Berger [33]
6Ralf Blossey [39]
7Torsten Blum [35] [41]
8Nicolas Boghossian [21] [25]
9Erich Bornberg-Bauer [30]
10Andreas Burchardt [27]
11Stefan Burkhardt [18]
12Alberto Caprara [29] [34]
13Nicole Comtesse [32] [37] [38]
14Andreas Crauser [18]
15Amitava Datta [5] [8]
16Markus Eiglsperger [30]
17Yasser A. Elnakady [38]
18Paolo Ferragina [18]
19Jan Fuhrmann [44]
20Andreas Gerasch [35] [41] [42]
21Andreas Hildebrandt [27] [33] [35] [36] [39] [43]
22Ralf Hofestädt [31]
23Andreas Hofmann [33]
24Christian G. Huber [33]
25Bernd Jung [13] [19] [22]
26Michael Kaufmann [30] [35] [41] [42]
27John D. Kececioglu [11] [23]
28Andreas Keller [37] [38] [40] [42]
29Gunnar W. Klau [45]
30Benny Kneissl [38]
31Oliver Kohlbacher [20] [21] [24] [25] [26] [27] [28] [30] [35] [36] [39] [41] [42] [45]
32Jan Küntzer [32] [35] [38] [41] [42]
33Nicole Ludwig [37]
34Eckart Meese [32] [37] [38]
35Kurt Mehlhorn [11] [23]
36Andreas Moll [27] [36]
37Burkhard Morgenstern [16] [17]
38Peter Müller [13] [19] [22] [26] [28]
39Rolf Müller [38]
40Petra Mutzel [11] [23]
41Dirk Neumann [44]
42Herbert Oberacher [33]
43Knut Reinert [11] [14] [15] [16] [17] [23] [29] [34] [45]
44Eric Rivals [18]
45Sergej Rjasanow [39]
46Christine Rüb [13] [19] [22]
47Alexander Rurainski [43] [44]
48T. Schäfer [30]
49Christian Schwarz [5] [8]
50Marite Sirava [30]
51Michiel H. M. Smid [1] [2] [3] [4] [5] [6] [7] [8] [9] [10]
52Hansjörg Toll [33]
53Martin Vingron [14] [15] [18] [23]

Colors in the list of coauthors

Copyright © Tue Nov 3 08:52:44 2009 by Michael Ley (ley@uni-trier.de)