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Thomas Lengauer Vis

Max-Planck-Institut für Informatik

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*2009
152EEHagen Blankenburg, Robert D. Finn, Andreas Prlic, Andrew M. Jenkinson, Fidel Ramírez, Dorothea Emig, Sven-Eric Schelhorn, Joachim Büch, Thomas Lengauer, Mario Albrecht: DASMI: exchanging, annotating and assessing molecular interaction data. Bioinformatics 25(10): 1321-1328 (2009)
2008
151EEOliver Sander, Francisco S. Domingues, Hongbo Zhu, Thomas Lengauer, Ingolf Sommer: Structural Descriptors of Protein-Protein Binding Sites. APBC 2008: 79-88
150EESven-Eric Schelhorn, Thomas Lengauer, Mario Albrecht: An integrative approach for predicting interactions of protein regions. ECCB 2008: 35-41
149EESteffen Bickel, Jasmina Bogojeska, Thomas Lengauer, Tobias Scheffer: Multi-task learning for HIV therapy screening. ICML 2008: 56-63
148EEMichal Rosen-Zvi, André Altmann, Mattia C. F. Prosperi, Ehud Aharoni, Hani Neuvirth, Anders Sönnerborg, Eugen Schülter, Daniel Struck, Yardena Peres, Francesca Incardona, Rolf Kaiser, Maurizio Zazzi, Thomas Lengauer: Selecting anti-HIV therapies based on a variety of genomic and clinical factors. ISMB 2008: 399-406
147EEAndreas Schlicker, Fidel Ramírez, Jörg Rahnenführer, Carola Huthmacher, Alejandro Pironti, Francisco S. Domingues, Thomas Lengauer, Mario Albrecht: Applications of semantic similarity measures. Ontologies and Text Mining for Life Sciences 2008
146EEJasmina Bogojeska, Thomas Lengauer, Jörg Rahnenführer: Stability analysis of mixtures of mutagenetic trees. BMC Bioinformatics 9: (2008)
145EEChristoph Bock, Thomas Lengauer: Computational epigenetics. Bioinformatics 24(1): 1-10 (2008)
144EEYassen Assenov, Fidel Ramírez, Sven-Eric Schelhorn, Thomas Lengauer, Mario Albrecht: Computing topological parameters of biological networks. Bioinformatics 24(2): 282-284 (2008)
143EEJasmina Bogojeska, Adrian Alexa, André Altmann, Thomas Lengauer, Jörg Rahnenführer: Rtreemix: an R package for estimating evolutionary pathways and genetic progression scores. Bioinformatics 24(20): 2391-2392 (2008)
142EEDorothea Emig, Melissa S. Cline, Thomas Lengauer, Mario Albrecht: Integrating expression data with domain interaction networks. Bioinformatics 24(21): 2546-2548 (2008)
141EEDorothea Emig, Melissa S. Cline, Karsten Klein, Anne Kunert, Petra Mutzel, Thomas Lengauer, Mario Albrecht: Integrative Visual Analysis of the Effects of Alternative Splicing on Protein Domain Interaction Networks. J. Integrative Bioinformatics 5(2): (2008)
2007
140EEFrancisco S. Domingues, Jörg Rahnenführer, Thomas Lengauer: Conformational analysis of alternative protein structures. Bioinformatics 23(23): 3131-3138 (2007)
139EEIngolf Sommer, Oliver Müller, Francisco S. Domingues, Oliver Sander, Joachim Weickert, Thomas Lengauer: Moment invariants as shape recognition technique for comparing protein binding sites. Bioinformatics 23(23): 3139-3146 (2007)
138EEAndreas Schlicker, Carola Huthmacher, Fidel Ramírez, Thomas Lengauer, Mario Albrecht: Functional evaluation of domain-domain interactions and human protein interaction networks. Bioinformatics 23(7): 859-865 (2007)
2006
137EEKirsten Roomp, Niko Beerenwinkel, Tobias Sing, Eugen Schülter, Joachim Büch, Saleta Sierra-Aragon, Martin Däumer, Daniel Hoffmann, Rolf Kaiser, Thomas Lengauer, Joachim Selbig: Arevir: A Secure Platform for Designing Personalized Antiretroviral Therapies Against HIV. DILS 2006: 185-194
136EEIris Antes, Shirley W. I. Siu, Thomas Lengauer: DynaPred: A structure and sequence based method for the prediction of MHC class I binding peptide sequences and conformations. ISMB (Supplement of Bioinformatics) 2006: 16-24
135EEOliver Sander, Ingolf Sommer, Thomas Lengauer: Local protein structure prediction using discriminative models. BMC Bioinformatics 7: 14 (2006)
134EEHongbo Zhu, Francisco S. Domingues, Ingolf Sommer, Thomas Lengauer: NOXclass: prediction of protein-protein interaction types. BMC Bioinformatics 7: 27 (2006)
133EEAndrew E. Torda, Thomas Lengauer: Editorial. Bioinformatics 22(10): 1157 (2006)
132EEBurkhard Heil, Jost Ludwig, Hella Lichtenberg-Fraté, Thomas Lengauer: Computational recognition of potassium channel sequences. Bioinformatics 22(13): 1562-1568 (2006)
131EEAdrian Alexa, Jörg Rahnenführer, Thomas Lengauer: Improved scoring of functional groups from gene expression data by decorrelating GO graph structure. Bioinformatics 22(13): 1600-1607 (2006)
130EEJochen Maydt, Thomas Lengauer: Recco: recombination analysis using cost optimization. Bioinformatics 22(9): 1064-1071 (2006)
129EEDirk Neumann, Oliver Kohlbacher, Christian Merkwirth, Thomas Lengauer: A Fully Computational Model for Predicting Percutaneous Drug Absorption. Journal of Chemical Information and Modeling 46(1): 424-429 (2006)
128EEAndreas Kämper, Joannis Apostolakis, Matthias Rarey, Christel M. Marian, Thomas Lengauer: Fully Automated Flexible Docking of Ligands into Flexible Synthetic Receptors Using Forward and Inverse Docking Strategies. Journal of Chemical Information and Modeling 46(2): 903-911 (2006)
127EEAndreas Steffen, Andreas Kämper, Thomas Lengauer: Flexible Docking of Ligands into Synthetic Receptors Using a Two-Sided Incremental Construction Algorithm. Journal of Chemical Information and Modeling 46(4): 1695-1703 (2006)
2005
126EEMario Albrecht, Carola Huthmacher, Silvio C. E. Tosatto, Thomas Lengauer: Decomposing protein networks into domain-domain interactions. ECCB/JBI 2005: 221
125 Tobias Sing, Niko Beerenwinkel, Thomas Lengauer, Valentina Svicher, Francesca Ceccherini-Silberstein, Carlo-Federico Perno: Supervised and Unsupervised Approaches for Analyzing Covariation and Phenotypic Impact of HIV Drug Resistance Mutations. LWA 2005: 234-239
124EETobias Sing, Valentina Svicher, Niko Beerenwinkel, Francesca Ceccherini-Silberstein, Martin Däumer, Rolf Kaiser, Hauke Walter, Klaus Korn, Daniel Hoffmann, Mark Oette, Jürgen K. Rockstroh, Gerd Fätkenheuer, Carlo-Federico Perno, Thomas Lengauer: Characterization of Novel HIV Drug Resistance Mutations Using Clustering, Multidimensional Scaling and SVM-Based Feature Ranking. PKDD 2005: 285-296
123EEAndreas Hahn, Jörg Rahnenführer, Priti Talwar, Thomas Lengauer: Confirmation of human protein interaction data by human expression data. BMC Bioinformatics 6: 112 (2005)
122EEJörg Rahnenführer, Niko Beerenwinkel, Wolfgang A. Schulz, Christian Hartmann, Andreas von Deimling, Bernd Wullich, Thomas Lengauer: Estimating cancer survival and clinical outcome based on genetic tumor progression scores. Bioinformatics 21(10): 2438-2446 (2005)
121EETobias Sing, Oliver Sander, Niko Beerenwinkel, Thomas Lengauer: ROCR: visualizing classifier performance in R. Bioinformatics 21(20): 3940-3941 (2005)
120EENiko Beerenwinkel, Tobias Sing, Thomas Lengauer, Jörg Rahnenführer, Kirsten Roomp, Igor Savenkov, Roman Fischer, Daniel Hoffmann, Joachim Selbig, Klaus Korn, Hauke Walter, Thomas Berg, Patrick Braun, Gerd Fätkenheuer, Mark Oette, Jürgen K. Rockstroh, Bernd Kupfer, Rolf Kaiser, Martin Däumer: Computational methods for the design of effective therapies against drug resistant HIV strains. Bioinformatics 21(21): 3943-3950 (2005)
119EEChristoph Bock, Sabine Reither, Thomas Mikeska, Martina Paulsen, Jörn Walter, Thomas Lengauer: BiQ Analyzer: visualization and quality control for DNA methylation data from bisulfite sequencing. Bioinformatics 21(21): 4067-4068 (2005)
118EENiko Beerenwinkel, Jörg Rahnenführer, Rolf Kaiser, Daniel Hoffmann, Joachim Selbig, Thomas Lengauer: Mtreemix: a software package for learning and using mixture models of mutagenetic trees. Bioinformatics 21(9): 2106-2107 (2005)
117EEChristian Merkwirth, Thomas Lengauer: Automatic Generation of Complementary Descriptors with Molecular Graph Networks. Journal of Chemical Information and Modeling 45(5): 1159-1168 (2005)
116EEIris Antes, Christian Merkwirth, Thomas Lengauer: POEM: Parameter Optimization Using Ensemble Methods: Application to Target Specific Scoring Functions. Journal of Chemical Information and Modeling 45(5): 1291-1302 (2005)
115EENiko Beerenwinkel, Jörg Rahnenführer, Martin Däumer, Daniel Hoffmann, Rolf Kaiser, Joachim Selbig, Thomas Lengauer: Learning Multiple Evolutionary Pathways from Cross-Sectional Data. Journal of Computational Biology 12(6): 584-598 (2005)
114EEThomas Lengauer: The DFG Priority Program "Informatics Methods for the Analysis and Interpretation of Large Genomic Datasets". it - Information Technology 47(4): 226-231 (2005)
2004
113EENiko Beerenwinkel, Jörg Rahnenführer, Martin Däumer, Daniel Hoffmann, Rolf Kaiser, Joachim Selbig, Thomas Lengauer: Learning multiple evolutionary pathways from cross-sectional data. RECOMB 2004: 36-44
112 Tobias Sing, Niko Beerenwinkel, Thomas Lengauer: Learning Mixtures of Localized Rules by Maximizing the Area Under the ROC Curve. ROCAI 2004: 89-96
111EENiklas von Öhsen, Ingolf Sommer, Ralf Zimmer, Thomas Lengauer: Arby: automatic protein structure prediction using profile-profile alignment and confidence measures. Bioinformatics 20(14): 2228-2235 (2004)
110EETorsten Crass, Iris Antes, Rico Basekow, Peer Bork, Christian Buning, Maik Christensen, Holger Claussen, Christian Ebeling, Peter Ernst, Valérie Gailus-Durner, Karl-Heinz Glatting, Rolf Gohla, Frank Gößling, Korbinian Grote, Karsten R. Heidtke, Alexander Herrmann, Sean O'Keeffe, O. Kießlich, Sven Kolibal, Jan O. Korbel, Thomas Lengauer, Ines Liebich, Mark van der Linden, Hannes Luz, Kathrin Meissner, Christian von Mering, Heinz-Theodor Mevissen, Hans-Werner Mewes, Holger Michael, Martin Mokrejs, Tobias Müller, Heike Pospisil, Matthias Rarey, Jens G. Reich, Ralf Schneider, Dietmar Schomburg, Steffen Schulze-Kremer, Knut Schwarzer, Ingolf Sommer, Stephan Springstubbe, Sándor Suhai, Gnanasekaran Thoppae, Martin Vingron, Jens Warfsmann, Thomas Werner, Daniel Wetzler, Edgar Wingender, Ralf Zimmer: The Helmholtz Network for Bioinformatics: an integrative web portal for bioinformatics resources. Bioinformatics 20(2): 268-270 (2004)
109EEIngolf Sommer, Jörg Rahnenführer, Francisco S. Domingues, U. de Lichtenberg, Thomas Lengauer: Predicting protein structure classes from function predictions. Bioinformatics 20(5): 770-776 (2004)
108EEChristian Merkwirth, Harald Mauser, Tanja Schulz-Gasch, Olivier Roche, Martin Stahl, Thomas Lengauer: Ensemble Methods for Classification in Cheminformatics. Journal of Chemical Information and Modeling 44(6): 1971-1978 (2004)
2003
107 Thomas Lengauer: Analyzing resistance phenomena in HIV with bioinformatics methods. ECCB 2003: 92
106EENiko Beerenwinkel, Thomas Lengauer, Martin Däumer, Rolf Kaiser, Hauke Walter, Klaus Korn, Daniel Hoffmann, Joachim Selbig: Methods for optimizing antiviral combination therapies. ISMB (Supplement of Bioinformatics) 2003: 16-25
105 Mario Albrecht, Thomas Lengauer: Pyranose Oxidase Identified as A Member of the GMC Oxidoreductase Family. Bioinformatics 19(10): 1216-1220 (2003)
104 Mario Albrecht, Thomas Lengauer, Stefan Schreiber: Disease-associated variants in PYPAF1 and NOD2 result in similar alterations of conserved sequence. Bioinformatics 19(17): 2171-2175 (2003)
103EEMarcus Peinado, Thomas Lengauer: Parallel 'go with the winners' algorithms in distributed memory models. J. Parallel Distrib. Comput. 63(9): 801-814 (2003)
102EEAlexander Zien, Juliane Fluck, Ralf Zimmer, Thomas Lengauer: Microarrays: How Many Do You Need? Journal of Computational Biology 10(3/4): 653-667 (2003)
101 Niko Beerenwinkel, Martin Däumer, Mark Oette, Klaus Korn, Daniel Hoffmann, Rolf Kaiser, Thomas Lengauer, Joachim Selbig, Hauke Walter: Geno2pheno: estimating phenotypic drug resistance from HIV-1 genotypes. Nucleic Acids Research 31(13): 3850-3855 (2003)
2002
100 Thomas Lengauer: Editorial. ECCB 2002: 1
99 Thomas Lengauer: ECCB 2002 Organization. ECCB 2002: 2-3
98 Daniel Hanisch, Alexander Zien, Ralf Zimmer, Thomas Lengauer: Co-clustering of biological networks and gene expression data. ISMB 2002: 145-154
97EEAlexander Zien, Juliane Fluck, Ralf Zimmer, Thomas Lengauer: Microarrays: how many do you need? RECOMB 2002: 321-330
96 Ingolf Sommer, Alexander Zien, Niklas von Öhsen, Ralf Zimmer, Thomas Lengauer: Confidence measures for protein fold recognition. Bioinformatics 18(6): 802-812 (2002)
95EEDaniel Hanisch, Ralf Zimmer, Thomas Lengauer: ProML - the Protein Markup Language for specification of protein sequences, structures and families. In Silico Biology 2: 29 (2002)
94EEMario Albrecht, Daniel Hanisch, Ralf Zimmer, Thomas Lengauer: Improving fold recognition of protein threading by experimental distance constraints. In Silico Biology 2: 30 (2002)
93EEJan Freudenberg, Ralf Zimmer, Daniel Hanisch, Thomas Lengauer: A hypergraph-based method for unification of existing protein structure- and sequence-families. In Silico Biology 2: 31 (2002)
92 Thomas Lengauer: Preface: Special RECOMB 2001 Issue. Journal of Computational Biology 9(2): 147-148 (2002)
91EESally A. Hindle, Matthias Rarey, Christian Buning, Thomas Lengauer: Flexible docking under pharmacophore type constraints. Journal of Computer-Aided Molecular Design 16(2): 129-149 (2002)
2001
90 Niko Beerenwinkel, Barbara Schmidt, Hauke Walter, Rolf Kaiser, Thomas Lengauer, Daniel Hoffmann, Klaus Korn, Joachim Selbig: Identifying drug resistance-associated patterns in HIV genotypes. German Conference on Bioinformatics 2001: 126-130
89 Ingolf Sommer, Niklas von Öhsen, Alexander Zien, Ralf Zimmer, Thomas Lengauer: Confidence Measures for Fold Recognition. German Conference on Bioinformatics 2001: 26-33
88 Daniel Hanisch, Ralf Zimmer, Thomas Lengauer: ProML - the Protein Markup Language for specification of protein sequences, structures and families. German Conference on Bioinformatics 2001: 58-67
87 Mario Albrecht, Daniel Hanisch, Ralf Zimmer, Thomas Lengauer: Improving Fold Recognition of Protein Threading by Experimental Distance Constraints. German Conference on Bioinformatics 2001: 68-77
86 Jan Freudenberg, Ralf Zimmer, Daniel Hanisch, Thomas Lengauer: A new Method for Unification of Existing Protein Structure- and Sequence-Families. German Conference on Bioinformatics 2001: 78-84
85 Alexander Zien, Thomas Aigner, Ralf Zimmer, Thomas Lengauer: Centralization: a new method for the normalization of gene expression data. ISMB (Supplement of Bioinformatics) 2001: 323-331
84EEThomas Lengauer: Computational Biology at the Beginning of the Post-genomic Era. Informatics 2001: 341-355
83EENiko Beerenwinkel, Barbara Schmidt, Hauke Walter, Rolf Kaiser, Thomas Lengauer, Daniel Hoffmann, Klaus Korn, Joachim Selbig: Geno2pheno: Interpreting Genotypic HIV Drug Resistance Tests. IEEE Intelligent Systems 16(6): 35-41 (2001)
2000
82 Philip E. Bourne, Michael Gribskov, Russ B. Altman, Nancy Jensen, Debra A. Hope, Thomas Lengauer, Julie C. Mitchell, Eric D. Scheeff, Chris Smith, Shawn Strande, Helge Weissig: Proceedings of the Eighth International Conference on Intelligent Systems for Molecular Biology, August 19-23, 2000, La Jolla / San Diego, CA, USA AAAI 2000
81EEThomas Lengauer: Computational Biology - Algorithms and More. ESA 2000: 9-19
80 Thomas Lengauer: Bioinformatics Problems Along the Process Line from Genomic Data to New Drugs. German Conference on Bioinformatics 2000: 189
79 Alexander Zien, Robert Küffner, Ralf Zimmer, Thomas Lengauer: Analysis of Gene Expression Data with Pathway Scores. ISMB 2000: 407-417
78EEAlexander Zien, Ralf Zimmer, Thomas Lengauer: A simple iterative approach to parameter optimization. RECOMB 2000: 318-327
77 Alexander Zien, Gunnar Rätsch, Sebastian Mika, Bernhard Schölkopf, Thomas Lengauer, Klaus-Robert Müller: Engineering support vector machine kernels that recognize translation initiation sites. Bioinformatics 16(9): 799-807 (2000)
76 Robert Küffner, Ralf Zimmer, Thomas Lengauer: Pathway analysis in metabolic databases via differential metabolic display (DMD). Bioinformatics 16(9): 825-836 (2000)
75 Thomas Lengauer, Ralf Zimmer: Protein Structure Prediction Methods for Drug Design. Briefings in Bioinformatics 1(3): 275-288 (2000)
74 Alexander Zien, Ralf Zimmer, Thomas Lengauer: A Simple Iterative Approach to Parameter Optimization. Journal of Computational Biology 7(3-4): 483-501 (2000)
73EEChristian Lemmen, Thomas Lengauer: Computational methods for the structural alignment of molecules. Journal of Computer-Aided Molecular Design 14(3): 215-232 (2000)
1999
72 Thomas Lengauer, Reinhard Schneider, Peer Bork, Douglas L. Brutlag, Janice I. Glasgow, Hans-Werner Mewes, Ralf Zimmer: Proceedings of the Seventh International Conference on Intelligent Systems for Molecular Biology, August 6-10, 1999, Heidelberg, Germany AAAI 1999
71 Robert Küffner, Ralf Zimmer, Thomas Lengauer: Pathway analysis in metabolic databases via differetial metabolic display (DMD). German Conference on Bioinformatics 1999: 141-147
70 Alexander Zien, Gunnar Rätsch, Sebastian Mika, Bernhard Schölkopf, Christian Lemmen, Alex J. Smola, Thomas Lengauer, Klaus-Robert Müller: Engineering Support Vector Machine Kerneis That Recognize Translation Initialion Sites. German Conference on Bioinformatics 1999: 37-43
69EEChristian Lemmen, Alexander Zien, Ralf Zimmer, Thomas Lengauer: Application of Parameter Optimization to Molecular Comparison Problems. Pacific Symposium on Biocomputing 1999: 482-493
68EEThomas Lengauer: Invited Lecture: Discrete Optimization Methods for Packing Problems in Two and Three Dimensions - With Applications in the Textile and Car Manufacturing Industries. WG 1999: 27-28
67 Thomas Lengauer: Editorial. The Seventh International Conference on Intelligent Systems for Molecular Biology (ISMB'99). Bioinformatics 15(10): 775 (1999)
66 Joachim Selbig, Heinz-Theodor Mevissen, Thomas Lengauer: Decision tree-based formation of consensus protein secondary structure prediction. Bioinformatics 15(12): 1039-1046 (1999)
65 Matthias Rarey, Bernd Kramer, Thomas Lengauer: Docking of hydrophobic ligands with interaction-based matching algorithms. Bioinformatics 15(3): 243-250 (1999)
1998
64 Matthias Rarey, Bernd Kramer, Thomas Lengauer: Docking of hydrophobic ligands with interaction-based matching algorithms. German Conference on Bioinformatics 1998
63EEMarcus Peinado, Thomas Lengauer: Random Generation of Embedded Graphs and an Extension to Dobrushin Uniqueness (Extended Abstract). STOC 1998: 176-185
62EEChristian Lemmen, Claus Hiller, Thomas Lengauer: RigFit: A new approach to superimposing ligand molecules. Journal of Computer-Aided Molecular Design 12(5): 491-502 (1998)
1997
61 Ralf Hofestädt, Thomas Lengauer, Markus Löffler, Dietmar Schomburg: Bioinformatics, German Conference on Bioinformatics, Leipzig, Germany, September 30 - October 2, 1996, Selected Papers Springer 1997
60 Franz-Josef Brandenburg, Michael Jünger, Petra Mutzel, Thomas Lengauer: Algorithmen zum automatischen Zeichnen von Graphen im Rahmen des DFG-Schwerpunkts Effiziente Algorithmen für diskrete Probleme und ihre Anwendungen. GI Jahrestagung 1997: 58-67
59 Thomas Lengauer: DFG-Schwerpunkt: Informatikmethoden zur Analyse und Interpretation großer genomischer Datenmengen. GI Jahrestagung 1997: 76-84
58 Christian Lemmen, Claus Hiller, Thomas Lengauer: RigFit: a new approach to superimposing ligand molecules. German Conference on Bioinformatics 1997: 103-105
57EEMarcus Peinado, Thomas Lengauer: Parallel 'Go with the Winners' Algorithms in the LogP Model. IPPS 1997: 656-664
56 Ina Koch, Thomas Lengauer: Detection of Distant Structural Similarities in a Set of Proteins Using a Fast Graph-Based Method. ISMB 1997: 167-178
55 Marcus Peinado, Thomas Lengauer: `Go with the winners' Generators with Applications to Molecular Modeling. RANDOM 1997: 135-149
54EERalf Zimmer, Thomas Lengauer: Fast and numerically stable parametric alignment of biosequences. RECOMB 1997: 344-353
53EEChristian Lemmen, Thomas Lengauer: Time-efficient flexible superposition of medium-sized molecules. Journal of Computer-Aided Molecular Design 11(4): 357-368 (1997)
52EEMatthias Rarey, Bernd Kramer, Thomas Lengauer: Multiple automatic base selection: Protein-ligand docking based on incremental construction without manual intervention. Journal of Computer-Aided Molecular Design 11(4): 369-384 (1997)
1996
51EERalf Heckmann, Thomas Lengauer: Computing Upper and Lower Bounds on Textile Nesting Problems. ESA 1996: 392-405
50 Christian Lemmen, Thomas Lengauer: Time-Efficient Flexible Superposition of Medium-Sized Molecules and Molecular Fragments. German Conference on Bioinformatics 1996: 257-259
49 Ina Koch, Thomas Lengauer, Egon Wanke: An Algorithm for Finding Maximal Common Subtopologies in a Set of Protein Structures. Journal of Computational Biology 3(2): 289-306 (1996)
48 Matthias Rarey, Stephan Wefing, Thomas Lengauer: Placement of medium-sized molecular fragments into active sites of proteins. Journal of Computer-Aided Molecular Design 10(1): 41-54 (1996)
1995
47 Christopher J. Rawlings, Dominic A. Clark, Russ B. Altman, Lawrence Hunter, Thomas Lengauer, Shoshana J. Wodak: Proceedings of the Third International Conference on Intelligent Systems for Molecular Biology, Cambridge, United Kingdom, July 16-19, 1995 AAAI 1995
46EEElof Frank, Thomas Lengauer: APPlaUSE: Area and performance optimization in a unified placement and synthesis environment. ICCAD 1995: 662-667
45 Matthias Rarey, Bernd Kramer, Thomas Lengauer: Time-Efficient Docking of Flexible Ligands into Active Sites of Proteins. ISMB 1995: 300-308
44 Ralf Thiele, Ralf Zimmer, Thomas Lengauer: Recursive Dynamic Programming for Adaptive Sequence and Structure Alignment. ISMB 1995: 384-392
1994
43EEDirk Theune, Ralf Thiele, W. John, Thomas Lengauer: Robust methods for EMC-driven routing. IEEE Trans. on CAD of Integrated Circuits and Systems 13(11): 1366-1378 (1994)
1993
42 Thomas Lengauer: Algorithms - ESA '93, First Annual European Symposium, Bad Honnef, Germany, September 30 - October 2, 1993, Proceedings Springer 1993
41 Ralf Hofestädt, Fritz Krückeberg, Thomas Lengauer: Informatik in den Biowissenschaften, 1. Fachtagung der GI-FG 4.0.3 "Informatik in den Biowissenschaften", Bonn, 15./16. Februar 1993, Proceedings Springer 1993
40 Thomas Lengauer: Algorithmic Research Problems in Molecular Bioinformatics. ISTCS 1993: 177-192
39 Thomas Lengauer: Informatik in den technischen Disziplinen. Perspektiven der Informatik 1993: 13-16
38 Thomas Lengauer: Informatik in den Naturwissenschaften. Perspektiven der Informatik 1993: 16-20
37 Jörg Heistermann, Thomas Lengauer: Efficient Automatic Part Nesting on Irregular and Inhomogeneous Surfaces. SODA 1993: 251-259
36EEThomas Lengauer, Rolf Müller: Robust and accurate hierarchical floorplanning with integrated global wiring. IEEE Trans. on CAD of Integrated Circuits and Systems 12(6): 802-809 (1993)
35EEThomas Lengauer, Egon Wanke: Efficient Decision Procedures for Graph Properties on Centext-Free Graph Languages. J. ACM 40(2): 368-393 (1993)
34 Ralf Hofestädt, Fritz Krückeberg, Thomas Lengauer: 1. Fachtagung ``Informatik in den Biowissenschaften''. KI 7(3): 31 (1993)
1992
33 Franz Höfting, Thomas Lengauer, Egon Wanke: Processing of Hierarchically Defined Graphs and Graph Families. Data Structures and Efficient Algorithms 1992: 44-69
32EEDirk Theune, Ralf Thiele, Thomas Lengauer, Anja Feldmann: HERO: hierarchical EMC-constrained routing. ICCAD 1992: 468-472
31 Thomas Lengauer, Klaus W. Wagner: The Correlation between the Complexities of the Nonhierarchical and Hierarchical Versions of Graph Problems. J. Comput. Syst. Sci. 44(1): 63-93 (1992)
1991
30EEThomas Lengauer, Dirk Theune: Efficient Algorithms for Path Problems with Gernal Cost Citeria. ICALP 1991: 314-326
29 Thomas Lengauer, Dirk Theune: Unstructured Path Problems and the Making of Semirings (Preliminary Version). WADS 1991: 189-200
28EEJörg Heisterman, Thomas Lengauer: The efficient solution of integer programs for hierarchical global routing. IEEE Trans. on CAD of Integrated Circuits and Systems 10(6): 748-753 (1991)
1990
27 Christian Choffrut, Thomas Lengauer: STACS 90, 7th Annual Symposium on Theoretical Aspects of Computer Science, Rouen, France, February 22-24, 1990, Proceedings Springer 1990
26 Thomas Lengauer, Rolf Müller: A Robust Framework for Hierarchical Floorplanning with Integrated Global Wiring. ICCAD 1990: 148-151
25 Thomas Lengauer: VLSI Theory. Handbook of Theoretical Computer Science, Volume A: Algorithms and Complexity (A) 1990: 835-868
24 Thomas Lengauer, Klaus W. Wagner: The Binary Network Flow Problem is Logspace Complete for P. Theor. Comput. Sci. 75(3): 357-363 (1990)
1989
23EEThomas Lengauer: Hierarchical planarity testing algorithms. J. ACM 36(3): 474-509 (1989)
1988
22EEThomas Lengauer, Egon Wanke: Efficient Analysis of Graph Properties on Context-free Graph Languages (Extended Abstract). ICALP 1988: 379-393
21 Thomas Lengauer, Egon Wanke: Efficient processing of hierarchical graphs for engineering design. Bulletin of the EATCS 35: 143-157 (1988)
20 Thomas Lengauer, Egon Wanke: Efficient Solution of Connectivity Problems on Hierarchically Defined Graphs. SIAM J. Comput. 17(6): 1063-1080 (1988)
1987
19EEThomas Lengauer, Klaus W. Wagner: The Correlation Between the Complexities of the Nonhierarchical and Hierarchical Versions of Graph Problems. STACS 1987: 100-113
18EEJürgen Doenhardt, Thomas Lengauer: Algorithmic Aspects of One-Dimensional Layout Compaction. IEEE Trans. on CAD of Integrated Circuits and Systems 6(5): 863-878 (1987)
17 Thomas Lengauer: Efficient Algorithms for Finding Minimum Spanning Forests of Hierarchically Defined Graphs. J. Algorithms 8(2): 260-284 (1987)
1986
16 Rolf Müller, Thomas Lengauer: Linear Algorithms For Two CMOS Layout Problems. Aegean Workshop on Computing 1986: 121-132
15 Thomas Lengauer: Exploiting Hierarchy in VLSI Design. Aegean Workshop on Computing 1986: 180-193
14 Thomas Lengauer: Hierarchische Darstellung geometrischer Objekte und ihre algorithmische Bedeutung. GI Jahrestagung (1) 1986: 456-469
13EEThomas Lengauer: Hierarchical Planary Testing Algorithms. ICALP 1986: 215-225
12EEThomas Lengauer: Efficient Algorithms for Finding Minimum Spanning Forests of Hierarchically Defined Graphs. STACS 1986: 153-170
1984
11 Thomas Lengauer: Algorithmische Spezifikation von symbolischen Layouts integrierter Schaltkreise. GI Jahrestagung (Fachgespräche) 1984: 5-16
10 Thomas Lengauer: On the Solution of Inequality Systems Relevant to IC-Layout. J. Algorithms 5(3): 408-421 (1984)
1982
9 Thomas Lengauer: The Complexity of Compacting Hierarchically Specified Layouts of Integrated Circuits (Preliminary Version) FOCS 1982: 358-368
8 Thomas Lengauer: Cube-Connected Cycles - Shuffle Exchange Graph - Das aktuelle Schlagwort. Informatik Spektrum 5(3): 192-194 (1982)
7EEThomas Lengauer, Robert Endre Tarjan: Asymptotically tight bounds on time-space trade-offs in a pebble game. J. ACM 29(4): 1087-1130 (1982)
1981
6 Thomas Lengauer: Black-White Pebbles and Graph Separation. Acta Inf. 16: 465-475 (1981)
1980
5 Thomas Lengauer, Robert Endre Tarjan: The Space Complexity of Pebble Games on Trees. Inf. Process. Lett. 10(4/5): 184-188 (1980)
4 John R. Gilbert, Thomas Lengauer, Robert Endre Tarjan: The Pebbling Problem is Complete in Polynomial Space. SIAM J. Comput. 9(3): 513-524 (1980)
1979
3 John R. Gilbert, Thomas Lengauer, Robert Endre Tarjan: The Pebbling Problem is Complete in Polynomial Space STOC 1979: 237-248
2 Thomas Lengauer, Robert Endre Tarjan: Upper and Lower Bounds on Time-Space Tradeoffs STOC 1979: 262-277
1EEThomas Lengauer, Robert Endre Tarjan: A Fast Algorithm for Finding Dominators in a Flowgraph. ACM Trans. Program. Lang. Syst. 1(1): 121-141 (1979)

Coauthor Index

1Ehud Aharoni [148]
2Thomas Aigner [85]
3Mario Albrecht [87] [94] [104] [105] [126] [138] [141] [142] [144] [147] [150] [152]
4Adrian Alexa [131] [143]
5Russ B. Altman [47] [82]
6André Altmann [143] [148]
7Iris Antes [110] [116] [136]
8Joannis Apostolakis [128]
9Yassen Assenov [144]
10Rico Basekow [110]
11Niko Beerenwinkel [83] [90] [101] [106] [112] [113] [115] [118] [120] [121] [122] [124] [125] [137]
12Thomas Berg [120]
13Steffen Bickel [149]
14Hagen Blankenburg [152]
15Christoph Bock [119] [145]
16Jasmina Bogojeska [143] [146] [149]
17Peer Bork [72] [110]
18Philip E. Bourne [82]
19Franz-Josef Brandenburg [60]
20Patrick Braun [120]
21Douglas L. Brutlag [72]
22Joachim Büch [137] [152]
23Christian Buning [91] [110]
24Francesca Ceccherini-Silberstein [124] [125]
25Christian Choffrut [27]
26Maik Christensen [110]
27Dominic A. Clark [47]
28Holger Claussen [110]
29Melissa S. Cline [141] [142]
30Torsten Crass [110]
31Martin Däumer [101] [106] [113] [115] [120] [124] [137]
32Andreas von Deimling [122]
33Jürgen Doenhardt [18]
34Francisco S. Domingues [109] [134] [139] [140] [147] [151]
35Christian Ebeling [110]
36Dorothea Emig [141] [142] [152]
37Peter Ernst [110]
38Gerd Fätkenheuer [120] [124]
39Anja Feldmann [32]
40Robert D. Finn [152]
41Roman Fischer [120]
42Juliane Fluck [97] [102]
43Elof Frank [46]
44Jan Freudenberg [86] [93]
45Valérie Gailus-Durner [110]
46John R. Gilbert [3] [4]
47Janice I. Glasgow [72]
48Karl-Heinz Glatting [110]
49Rolf Gohla [110]
50Frank Gößling [110]
51Michael Gribskov [82]
52Korbinian Grote [110]
53Andreas Hahn [123]
54Daniel Hanisch [86] [87] [88] [93] [94] [95] [98]
55Christian Hartmann [122]
56Ralf Heckmann [51]
57Karsten R. Heidtke [110]
58Burkhard Heil [132]
59Jörg Heisterman [28]
60Jörg Heistermann [37]
61Alexander Herrmann [110]
62Claus Hiller [58] [62]
63Sally A. Hindle [91]
64Ralf Hofestädt [34] [41] [61]
65Daniel Hoffmann [83] [90] [101] [106] [113] [115] [118] [120] [124] [137]
66Franz Höfting [33]
67Debra A. Hope [82]
68Lawrence Hunter [47]
69Carola Huthmacher [126] [138] [147]
70Francesca Incardona [148]
71Andrew M. Jenkinson [152]
72Nancy Jensen [82]
73W. John [43]
74Michael Jünger [60]
75Rolf Kaiser [83] [90] [101] [106] [113] [115] [118] [120] [124] [137] [148]
76Andreas Kämper [127] [128]
77O. Kießlich [110]
78Karsten Klein [141]
79Ina Koch [49] [56]
80Oliver Kohlbacher [129]
81Sven Kolibal [110]
82Jan O. Korbel [110]
83Klaus Korn [83] [90] [101] [106] [120] [124]
84Bernd Kramer [45] [52] [64] [65]
85Fritz Krückeberg [34] [41]
86Robert Küffner [71] [76] [79]
87Anne Kunert [141]
88Bernd Kupfer [120]
89Christian Lemmen [50] [53] [58] [62] [69] [70] [73]
90U. de Lichtenberg [109]
91Hella Lichtenberg-Fraté [132]
92Ines Liebich [110]
93Mark van der Linden [110]
94Markus Löffler [61]
95Jost Ludwig [132]
96Hannes Luz [110]
97Christel M. Marian [128]
98Harald Mauser [108]
99Jochen Maydt [130]
100Kathrin Meissner [110]
101Christian von Mering [110]
102Christian Merkwirth [108] [116] [117] [129]
103Heinz-Theodor Mevissen [66] [110]
104Hans-Werner Mewes [72] [110]
105Holger Michael [110]
106Sebastian Mika [70] [77]
107Thomas Mikeska [119]
108Julie C. Mitchell [82]
109Martin Mokrejs [110]
110Klaus-Robert Müller [70] [77]
111Oliver Müller [139]
112Rolf Müller [16] [26] [36]
113Tobias Müller [110]
114Petra Mutzel [60] [141]
115Dirk Neumann [129]
116Hani Neuvirth [148]
117Sean O'Keeffe [110]
118Mark Oette [101] [120] [124]
119Niklas von Öhsen [89] [96] [111]
120Martina Paulsen [119]
121Marcus Peinado [55] [57] [63] [103]
122Yardena Peres [148]
123Carlo-Federico Perno [124] [125]
124Alejandro Pironti [147]
125Heike Pospisil [110]
126Andreas Prlic [152]
127Mattia C. F. Prosperi [148]
128Jörg Rahnenführer [109] [113] [115] [118] [120] [122] [123] [131] [140] [143] [146] [147]
129Fidel Ramírez [138] [144] [147] [152]
130Matthias Rarey [45] [48] [52] [64] [65] [91] [110] [128]
131Gunnar Rätsch [70] [77]
132Christopher J. Rawlings [47]
133Jens G. Reich [110]
134Sabine Reither [119]
135Olivier Roche [108]
136Jürgen K. Rockstroh [120] [124]
137Kirsten Roomp [120] [137]
138Michal Rosen-Zvi [148]
139Oliver Sander [121] [135] [139] [151]
140Igor Savenkov [120]
141Eric D. Scheeff [82]
142Tobias Scheffer [149]
143Sven-Eric Schelhorn [144] [150] [152]
144Andreas Schlicker [138] [147]
145Barbara Schmidt [83] [90]
146Ralf Schneider [110]
147Reinhard Schneider [72]
148Bernhard Schölkopf [70] [77]
149Dietmar Schomburg [61] [110]
150Stefan Schreiber [104]
151Eugen Schülter [137] [148]
152Wolfgang A. Schulz [122]
153Tanja Schulz-Gasch [108]
154Steffen Schulze-Kremer [110]
155Knut Schwarzer [110]
156Joachim Selbig [66] [83] [90] [101] [106] [113] [115] [118] [120] [137]
157Saleta Sierra-Aragon [137]
158Tobias Sing [112] [120] [121] [124] [125] [137]
159Shirley W. I. Siu [136]
160Chris Smith [82]
161Alexander J. Smola (Alex J. Smola) [70]
162Ingolf Sommer [89] [96] [109] [110] [111] [134] [135] [139] [151]
163Anders Sönnerborg [148]
164Stephan Springstubbe [110]
165Martin Stahl [108]
166Andreas Steffen [127]
167Shawn Strande [82]
168Daniel Struck [148]
169Sándor Suhai [110]
170Valentina Svicher [124] [125]
171Priti Talwar [123]
172Robert Endre Tarjan [1] [2] [3] [4] [5] [7]
173Dirk Theune [29] [30] [32] [43]
174Ralf Thiele [32] [43] [44]
175Gnanasekaran Thoppae [110]
176Andrew E. Torda [133]
177Silvio C. E. Tosatto [126]
178Martin Vingron [110]
179Klaus W. Wagner [19] [24] [31]
180Hauke Walter [83] [90] [101] [106] [120] [124]
181Jörn Walter [119]
182Egon Wanke [20] [21] [22] [33] [35] [49]
183Jens Warfsmann [110]
184Stephan Wefing [48]
185Joachim Weickert [139]
186Helge Weissig [82]
187Thomas Werner [110]
188Daniel Wetzler [110]
189Edgar Wingender [110]
190Shoshana J. Wodak [47]
191Bernd Wullich [122]
192Maurizio Zazzi [148]
193Hongbo Zhu [134] [151]
194Alexander Zien [69] [70] [74] [77] [78] [79] [85] [89] [96] [97] [98] [102]
195Ralf Zimmer [44] [54] [69] [71] [72] [74] [75] [76] [78] [79] [85] [86] [87] [88] [89] [93] [94] [95] [96] [97] [98] [102] [110] [111]

Colors in the list of coauthors

Copyright © Tue Nov 3 08:52:44 2009 by Michael Ley (ley@uni-trier.de)