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Dominique Lavenier Vis

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*2009
42EEGuillaume Rizk, Dominique Lavenier: GPU Accelerated RNA Folding Algorithm. ICCS (1) 2009: 1004-1013
41EEVan-Hoa Nguyen, Alexandre Cornu, Dominique Lavenier: Implementing protein seed-based comparison algorithm on the SGI RASC-100 platform. IPDPS 2009: 1-7
40EEPierre Peterlongo, Jacques Nicolas, Dominique Lavenier, Raoul Vorc'h, Joël Querellou: c-GAMMA: Comparative Genome Analysis of Molecular Markers. PRIB 2009: 255-269
2008
39EEDominique Lavenier: Ordered index seed algorithm for intensive DNA sequence comparison. IPDPS 2008: 1-8
38EEXiaochun Ye, Van Hoa Nguyen, Dominique Lavenier, Dongrui Fan: Efficient Parallelization of a Protein Sequence Comparison Algorithm on Manycore Architecture. PDCAT 2008: 167-170
37EEVan Hoa Nguyen, Dominique Lavenier: Speeding up subset seed algorithm for intensive protein sequence comparison. RIVF 2008: 57-63
36EEPierre Peterlongo, Laurent Noé, Dominique Lavenier, Van Hoa Nguyen, Gregory Kucherov, Mathieu Giraud: Optimal neighborhood indexing for protein similarity search. BMC Bioinformatics 9: (2008)
35EEXianyang Jiang, Dominique Lavenier, Stephen S.-T. Yau: Coding Region Prediction Based on a Universal DNA Sequence Representation Method. Journal of Computational Biology 15(10): 1237-1256 (2008)
2007
34EEPierre Peterlongo, Laurent Noé, Dominique Lavenier, Gilles Georges, Julien Jacques, Gregory Kucherov, Mathieu Giraud: Protein Similarity Search with Subset Seeds on a Dedicated Reconfigurable Hardware. PPAM 2007: 1240-1248
33EEMathieu Giraud, Philippe Veber, Dominique Lavenier: Path-Equivalent Developments in Acyclic Weighted Automata. Int. J. Found. Comput. Sci. 18(4): 799-811 (2007)
32EEDominique Lavenier, Gilles Georges, X. Liu: A Reconfigurable Index FLASH Memory tailored to Seed-Based Genomic Sequence Comparison Algorithms. VLSI Signal Processing 48(3): 255-269 (2007)
2006
31EEMathieu Giraud, Philippe Veber, Dominique Lavenier: Path-Equivalent Removals of epsilon-transitions in a Genomic Weighted Finite Automaton. CIAA 2006: 23-33
30EESébastien Tempel, Mathieu Giraud, Dominique Lavenier, Israel-César Lerman, Anne-Sophie Valin, Ivan Couée, Abdelhak El Amrani, Jacques Nicolas: Domain organization within repeated DNA sequences: application to the study of a family of transposable elements. Bioinformatics 22(16): 1948-1954 (2006)
2005
29 Nicolas Ventroux, Frédéric Blanc, Dominique Lavenier: A Low Complex Scheduling Algorithm for Multi-processor System-on-Chip. Parallel and Distributed Computing and Networks 2005: 540-545
28EERumen Andonov, Dominique Lavenier, Philippe Veber, Nicola Yanev: Dynamic programming for LR-PCR segmentation of bacterium genomes. Concurrency and Computation: Practice and Experience 17(14): 1657-1668 (2005)
27 Mathieu Giraud, Dominique Lavenier: Dealing with Hardware Space Limits when Removing Epsilon-Transitions in a Genomic Weighted Finite Automaton. Journal of Automata, Languages and Combinatorics 10(2/3): 265-285 (2005)
26EEStéphane Guyetant, Mathieu Giraud, Ludovic L'Hours, Steven Derrien, Stéphane Rubini, Dominique Lavenier, Frédéric Raimbault: Cluster of re-configurable nodes for scanning large genomic banks. Parallel Computing 31(1): 73-96 (2005)
25 Raphaël David, Dominique Lavenier, Sébastien Pillement: Du microprocesseur au circuit FPGA. Une analyse sous l'angle de la reconfiguration. Technique et Science Informatiques 24(4): 395-422 (2005)
24EEMathieu Giraud, Stéphane Guyetant, Dominique Lavenier: Encodage linéaire d'automates pondérés. Filtrage de motifs génomiques et application sur l'architecture prototype R-disk. Technique et Science Informatiques 24(6): 703-724 (2005)
2004
23EEMathieu Giraud, Dominique Lavenier: Linear Encoding Scheme for Weighted Finite Automata. CIAA 2004: 146-155
22EERumen Andonov, Dominique Lavenier, Philippe Veber, Nicola Yanev: Dynamic Programming for LR-PCR Segmention of Bacterium Genomes. IPDPS 2004
2003
21 Dominique Lavenier, Stéphane Guyetant, Steven Derrien, Stéphane Rubini: A Reconfigurable Parallel Disk System for Filtering Genomic Banks. Engineering of Reconfigurable Systems and Algorithms 2003: 154-166
20EEFrédéric Raimbault, Dominique Lavenier: ROOM. Des machines reconfigurables orientées objet pour les applications spécifiques. Technique et Science Informatiques 22(6): 759-782 (2003)
19EEMaya Gokhale, Janette Frigo, Kevin McCabe, James Theiler, Christophe Wolinski, Dominique Lavenier: Experience with a Hybrid Processor: K-Means Clustering. The Journal of Supercomputing 26(2): 131-148 (2003)
2001
18EEJanette Frigo, Maya Gokhale, Dominique Lavenier: Evaluation of the streams-C C-to-FPGA compiler: an applications perspective. FPGA 2001: 134-140
17EELoïc Lagadec, Dominique Lavenier, Erwan Fabiani, Bernard Pottier: Placing, Routing, and Editing Virtual FPGAs. FPL 2001: 357-366
16 Yan Solihin, Kirk W. Cameron, Yong Luo, Dominique Lavenier, Maya Gokhale: Mutable Functional Units and Their Applications on Microprocessors. ICCD 2001: 234-239
2000
15EEErwan Fabiani, Dominique Lavenier: Placement of Linear Arrays. FPL 2000: 849-852
14EEDominique Lavenier: An FPGA systolic array using pseudo-random bit generators for computing Goldbach partitions. Integration 30(1): 77-89 (2000)
1998
13EEDominique Lavenier, Yannick Saouter: Computing Goldbach Partitions Using Pseudo-random Bit Generator Operators on a FPFA Systolic Array. FPL 1998: 316-325
1997
12 Dominique Lavenier, Jean-Lin Pacherie: Parallel Processing for Scanning Genomic Data-Bases. PARCO 1997: 81-88
11 Pascale Guerdoux-Jamet, Dominique Lavenier: SAMBA: hardware accelerator for biological sequence comparison. Computer Applications in the Biosciences 13(6): 609-615 (1997)
1996
10EEPascale Guerdoux-Jamet, Dominique Lavenier, Charles Wagner, Patrice Quinton: Design and Implementation of a Parallel Architecture for Biological Sequence Comparison. Euro-Par, Vol. I 1996: 11-24
9EEDominique Lavenier: Dedicated Hardware for Biological Sequence Comparison. J. UCS 2(2): 77-86 (1996)
8EERoderick McConnell, Dominique Lavenier: Prototyping of VLSI components from a formal specification. VLSI Signal Processing 12(2): 177-186 (1996)
1995
7EEPascale Guerdoux-Jamet, Dominique Lavenier: Systolic Filter for Fast DNA Similarity Search. ASAP 1995: 145-156
6EEDominique Lavenier, Frédéric Raimbault, Patrice Frison: I/O and computation overlap on SIMD systolic arrays. VLSI Signal Processing 9(3): 153-165 (1995)
1994
5 Patrice Frison, François Charot, Eric Gautrin, Dominique Lavenier, Patrice Quinton, Frédéric Raimbault, Charles Wagner: From Equations to Hardware. Towards the Systematic Mapping of Algorithms onto Parallel Architectures. IJPRAI 8(2): 417-438 (1994)
1992
4 François Charot, Patrice Frison, Eric Gautrin, Dominique Lavenier, Patrice Quinton, Charles Wagner: From Equations to Hardware: Towards Systematic Mapping of Algorithms onto Parallel Architectures. ICPIA 1992: 1-15
1991
3 Patrice Frison, Dominique Lavenier: Experience in the design of paralle processor arrays. Algorithms and Parallel VLSI Architectures 1991: 233-242
2 Patrice Frison, Dominique Lavenier: A Fully Integrated Systolic Spelling Co-Processor. VLSI 1991: 257-266
1988
1 Patrice Frison, Dominique Lavenier: Fast Machine for Prototyping String Correction Algorithms. RIAO 1988: 1085-1100

Coauthor Index

1Abdelhak El Amrani [30]
2Rumen Andonov [22] [28]
3Frédéric Blanc [29]
4Kirk W. Cameron [16]
5François Charot [4] [5]
6Alexandre Cornu [41]
7Ivan Couée [30]
8Raphaël David [25]
9Steven Derrien [21] [26]
10Erwan Fabiani [15] [17]
11Dongrui Fan [38]
12Janette Frigo [18] [19]
13Patrice Frison [1] [2] [3] [4] [5] [6]
14Eric Gautrin [4] [5]
15Gilles Georges [32] [34]
16Mathieu Giraud [23] [24] [26] [27] [30] [31] [33] [34] [36]
17Maya Gokhale [16] [18] [19]
18Pascale Guerdoux-Jamet [7] [10] [11]
19Stéphane Guyetant [21] [24] [26]
20Julien Jacques [34]
21Xianyang Jiang [35]
22Gregory Kucherov [34] [36]
23Ludovic L'Hours [26]
24Loïc Lagadec [17]
25Israel-César Lerman [30]
26X. Liu [32]
27Yong Luo [16]
28Kevin McCabe [19]
29Roderick McConnell [8]
30Van Hoa Nguyen [36] [37] [38]
31Van-Hoa Nguyen [41]
32Jacques Nicolas [30] [40]
33Laurent Noé [34] [36]
34Jean-Lin Pacherie [12]
35Pierre Peterlongo [34] [36] [40]
36Sébastien Pillement [25]
37Bernard Pottier [17]
38Joël Querellou [40]
39Patrice Quinton [4] [5] [10]
40Frédéric Raimbault [5] [6] [20] [26]
41Guillaume Rizk [42]
42Stéphane Rubini [21] [26]
43Yannick Saouter [13]
44Yan Solihin [16]
45Sébastien Tempel [30]
46James Theiler [19]
47Anne-Sophie Valin [30]
48Philippe Veber [22] [28] [31] [33]
49Nicolas Ventroux [29]
50Raoul Vorc'h [40]
51Charles Wagner [4] [5] [10]
52Christophe Wolinski [19]
53Nicola Yanev [22] [28]
54Stephen S.-T. Yau [35]
55Xiaochun Ye [38]

Colors in the list of coauthors

Copyright © Tue Nov 3 08:52:44 2009 by Michael Ley (ley@uni-trier.de)