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Oscar P. Kuipers Vis

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*2009
12EERutger W. W. Brouwer, Sacha A. F. T. van Hijum, Oscar P. Kuipers: MINOMICS: visualizing prokaryote transcriptomics and proteomics data in a genomic context. Bioinformatics 25(1): 139-140 (2009)
11EEEvert-Jan Blom, Jos B. T. M. Roerdink, Oscar P. Kuipers, Sacha A. F. T. van Hijum: MOTIFATOR: detection and characterization of regulatory motifs using prokaryote transcriptome data. Bioinformatics 25(4): 550-551 (2009)
2008
10EEEvert-Jan Blom, Sacha A. F. T. van Hijum, Klaas J. Hofstede, Remko Silvis, Jos B. T. M. Roerdink, Oscar P. Kuipers: DISCLOSE : DISsection of CLusters Obtained by SEries of transcriptome data using functional annotations and putative transcription factor binding sites. BMC Bioinformatics 9: (2008)
9EESacha A. F. T. van Hijum, Richard J. S. Baerends, Aldert L. Zomer, Harma A. Karsens, Victoria Martin-Requena, Oswaldo Trelles, Jan Kok, Oscar P. Kuipers: Supervised Lowess normalization of comparative genome hybridization data - application to lactococcal strain comparisons. BMC Bioinformatics 9: (2008)
8EERutger W. W. Brouwer, Oscar P. Kuipers, Sacha A. F. T. van Hijum: The relative value of operon predictions. Briefings in Bioinformatics 9(5): 367-375 (2008)
7EEMichel A. Westenberg, Sacha A. F. T. van Hijum, Oscar P. Kuipers, J. B. T. M. Roerdink: Visualizing Genome Expression and Regulatory Network Dynamics in Genomic and Metabolic Context. Comput. Graph. Forum 27(3): 887-894 (2008)
2007
6EEEvert-Jan Blom, Dinne W. J. Bosman, Sacha A. F. T. van Hijum, Rainer Breitling, Lars Tijsma, Remko Silvis, Jos B. T. M. Roerdink, Oscar P. Kuipers: FIVA: Functional Information Viewer and Analyzer extracting biological knowledge from transcriptome data of prokaryotes. Bioinformatics 23(9): 1161-1163 (2007)
2006
5EECasper J. Albers, Ritsert C. Jansen, Jan Kok, Oscar P. Kuipers, Sacha A. F. T. van Hijum: SIMAGE: simulation of DNA-microarray gene expression data. BMC Bioinformatics 7: 205 (2006)
4EEAnne de Jong, Sacha A. F. T. van Hijum, Jetta J. E. Bijlsma, Jan Kok, Oscar P. Kuipers: BAGEL: a web-based bacteriocin genome mining tool. Nucleic Acids Research 34(Web-Server-Issue): 273-279 (2006)
2005
3EESacha A. F. T. van Hijum, Aldert L. Zomer, Oscar P. Kuipers, Jan Kok: Projector 2: contig mapping for efficient gap-closure of prokaryotic genome sequence assemblies. Nucleic Acids Research 33(Web-Server-Issue): 560-566 (2005)
2004
2EEMorris A. Swertz, E. O. de Brock, Sacha A. F. T. van Hijum, Anne de Jong, Girbe Buist, Richard J. S. Baerends, Jan Kok, Oscar P. Kuipers, Ritsert C. Jansen: Molecular Genetics Information System (MOLGENIS): alternatives in developing local experimental genomics databases. Bioinformatics 20(13): 2075-2083 (2004)
2003
1 Sacha A. F. T. van Hijum, Anne de Jong, Girbe Buist, Jan Kok, Oscar P. Kuipers: UniFrag and GenomePrimer: selection of primers for genome-wide production of unique amplicons. Bioinformatics 19(12): 1580-1582 (2003)

Coauthor Index

1Casper J. Albers [5]
2Richard J. S. Baerends [2] [9]
3Jetta J. E. Bijlsma [4]
4Evert-Jan Blom [6] [10] [11]
5Dinne W. J. Bosman [6]
6Rainer Breitling [6]
7E. O. de Brock [2]
8Rutger W. W. Brouwer [8] [12]
9Girbe Buist [1] [2]
10Sacha A. F. T. van Hijum [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12]
11Klaas J. Hofstede [10]
12Ritsert C. Jansen [2] [5]
13Anne de Jong [1] [2] [4]
14Harma A. Karsens [9]
15Jan Kok [1] [2] [3] [4] [5] [9]
16Victoria Martin-Requena [9]
17J. B. T. M. Roerdink (Jos B. T. M. Roerdink) [6] [7] [10] [11]
18Remko Silvis [6] [10]
19Morris A. Swertz [2]
20Lars Tijsma [6]
21Oswaldo Trelles (Oswaldo Trelles-Salazar) [9]
22Michel A. Westenberg [7]
23Aldert L. Zomer [3] [9]

Copyright © Tue Nov 3 08:52:44 2009 by Michael Ley (ley@uni-trier.de)