| * | 2009 |
| 10 | EE | Martin Renqiang Min,
Rui Kuang,
Anthony J. Bonner,
Zhaolei Zhang:
Learning Random-Walk Kernels for Protein Remote Homology Identification and Motif Discovery.
SDM 2009: 133-144 |
| 2008 |
| 9 | EE | TaeHyun Hwang,
Ze Tian,
Rui Kuang,
Jean-Pierre Kocher:
Learning on Weighted Hypergraphs to Integrate Protein Interactions and Gene Expressions for Cancer Outcome Prediction.
ICDM 2008: 293-302 |
| 8 | EE | TaeHyun Hwang,
Hugues Sicotte,
Ze Tian,
Baolin Wu,
Jean-Pierre Kocher,
Dennis A. Wigle,
Vipin Kumar,
Rui Kuang:
Robust and efficient identification of biomarkers by classifying features on graphs.
Bioinformatics 24(18): 2023-2029 (2008) |
| 2007 |
| 7 | EE | Iain Melvin,
Eugene Ie,
Rui Kuang,
Jason Weston,
William Stafford Noble,
Christina S. Leslie:
SVM-Fold: a tool for discriminative multi-class protein fold and superfamily recognition.
BMC Bioinformatics 8(S-4): (2007) |
| 2006 |
| 6 | EE | Jason Weston,
Rui Kuang,
Christina S. Leslie,
William Stafford Noble:
Protein Ranking by Semi-Supervised Network Propagation.
BMC Bioinformatics 7(S-1): (2006) |
| 2005 |
| 5 | EE | Rui Kuang,
Jason Weston,
William Stafford Noble,
Christina S. Leslie:
Motif-based protein ranking by network propagation.
Bioinformatics 21(19): 3711-3718 (2005) |
| 2004 |
| 4 | EE | Rui Kuang,
Eugene Ie,
Ke Wang,
Kai Wang,
Mahira Siddiqi,
Yoav Freund,
Christina S. Leslie:
Profile-Based String Kernels for Remote Homology Detection and Motif Extraction.
CSB 2004: 152-160 |
| 3 | EE | Rui Kuang,
Christina S. Leslie,
An-Suei Yang:
Protein backbone angle prediction with machine learning approaches.
Bioinformatics 20(10): 1612-1621 (2004) |
| 2 | EE | Christina S. Leslie,
Rui Kuang:
Fast String Kernels using Inexact Matching for Protein Sequences.
Journal of Machine Learning Research 5: 1435-1455 (2004) |
| 2003 |
| 1 | EE | Christina S. Leslie,
Rui Kuang:
Fast Kernels for Inexact String Matching.
COLT 2003: 114-128 |