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Ina Koch Vis

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*2008
21EEEva Grafahrend-Belau, Falk Schreiber, Monika Heiner, Andrea Sackmann, Björn H. Junker, Stefanie Grunwald, Astrid Speer, Katja Winder, Ina Koch: Modularization of biochemical networks based on classification of Petri net t-invariants. BMC Bioinformatics 9: (2008)
20EEStefanie Grunwald, Astrid Speer, Jörg Ackermann, Ina Koch: Petri net modelling of gene regulation of the Duchenne muscular dystrophy. Biosystems 92(2): 189-205 (2008)
19EEIna Koch, Georg Fuellen: A review of bioinformatics education in Germany. Briefings in Bioinformatics 9(3): 232-242 (2008)
2007
18EEAndrea Sackmann, Dorota Formanowicz, Piotr Formanowicz, Ina Koch, Jacek Blazewicz: An analysis of the Petri net based model of the human body iron homeostasis process. Computational Biology and Chemistry 31(1): 1-10 (2007)
2006
17EEMaurice Scheer, Frank Klawonn, Richard Münch, Andreas Grote, Karsten Hiller, Claudia Choi, Ina Koch, Max Schobert, Elisabeth Härtig, Ulrich Klages, Dieter Jahn: JProGO: a novel tool for the functional interpretation of prokaryotic microarray data using Gene Ontology information. Nucleic Acids Research 34(Web-Server-Issue): 510-515 (2006)
2005
16EESilke Trißl, Kristian Rother, Heiko Müller, Thomas Steinke, Ina Koch, Robert Preissner, Cornelius Frömmel, Ulf Leser: Columba: an integrated database of proteins, structures, and annotations. BMC Bioinformatics 6: 81 (2005)
15EEIna Koch, Björn H. Junker, Monika Heiner: Application of Petri net theory for modelling and validation of the sucrose breakdown pathway in the potato tuber. Bioinformatics 21(7): 1219-1226 (2005)
14EELouchka Popova-Zeugmann, Monika Heiner, Ina Koch: Time Petri Nets for Modelling and Analysis of Biochemical Networks. Fundam. Inform. 67(1-3): 149-162 (2005)
2004
13EEKristian Rother, Heiko Müller, Silke Trißl, Ina Koch, Thomas Steinke, Robert Preissner, Cornelius Frömmel, Ulf Leser: Columba: Multidimensional Data Integration of Protein Annotations. DILS 2004: 156-171
12EEMonika Heiner, Ina Koch: Petri Net Based Model Validation in Systems Biology. ICATPN 2004: 216-237
11EEPatrick May, Stefan Barthel, Ina Koch: PTGL - a web-based database application for protein topologies. Bioinformatics 20(17): 3277-3279 (2004)
10EEIna Koch, Markus Schüler, Monika Heiner: STEPP - Search Tool for Exploration of Petri net Paths: A new tool for Petri net-based path analysis in biochemical networks. In Silico Biology 5: (2004)
2003
9EEMonika Heiner, Ina Koch, Jürgen Will: Model Validation of Biological Pathways Using Petri Nets - Demonstrated for Apoptosis. CMSB 2003: 173
8EEKlaus Voss, Monika Heiner, Ina Koch: Steady state analysis of metabolic pathways using Petri nets. In Silico Biology 3: 31 (2003)
2002
7 Stéphanie Boué, Martin Vingron, Evgenia V. Kriventseva, Ina Koch: Theoretical analysis of alternative splice forms using computational methods. ECCB 2002: 65-73
6 Stefan Schuster, Thomas Pfeiffer, Ferdinand Moldenhauer, Ina Koch, Thomas Dandekar: Exploring the pathway structure of metabolism: decomposition into subnetworks and application to Mycoplasma pneumoniae. Bioinformatics 18(2): 351-361 (2002)
2001
5EEIna Koch: Enumerating all connected maximal common subgraphs in two graphs. Theor. Comput. Sci. 250(1-2): 1-30 (2001)
2000
4 Stefan Schuster, Thomas Pfeiffer, Ferdinand Moldenhauer, Ina Koch, Thomas Dandekar: Structural Analysis of Metabolic Networks: Elementary Flux Modes, Analogy to Petri Nets, and Application to Mycoplasma Pneumoniae. German Conference on Bioinformatics 2000: 115-120
1999
3 Ina Koch, Stefan Schuster, Monika Heiner: Simulation and analysis of metabolic networks by time-dependent Petri nets. German Conference on Bioinformatics 1999: 208-209
1997
2 Ina Koch, Thomas Lengauer: Detection of Distant Structural Similarities in a Set of Proteins Using a Fast Graph-Based Method. ISMB 1997: 167-178
1996
1 Ina Koch, Thomas Lengauer, Egon Wanke: An Algorithm for Finding Maximal Common Subtopologies in a Set of Protein Structures. Journal of Computational Biology 3(2): 289-306 (1996)

Coauthor Index

1Jörg Ackermann [20]
2Stefan Barthel [11]
3Jacek Blazewicz [18]
4Stéphanie Boué [7]
5Claudia Choi [17]
6Thomas Dandekar [4] [6]
7Dorota Formanowicz [18]
8Piotr Formanowicz [18]
9Cornelius Frömmel [13] [16]
10Georg Fuellen [19]
11Eva Grafahrend-Belau [21]
12Andreas Grote [17]
13Stefanie Grunwald [20] [21]
14Elisabeth Härtig [17]
15Monika Heiner [3] [8] [9] [10] [12] [14] [15] [21]
16Karsten Hiller [17]
17Dieter Jahn [17]
18Björn H. Junker [15] [21]
19Ulrich Klages [17]
20Frank Klawonn [17]
21Evgenia V. Kriventseva [7]
22Thomas Lengauer [1] [2]
23Ulf Leser [13] [16]
24Patrick May [11]
25Ferdinand Moldenhauer [4] [6]
26Heiko Müller [13] [16]
27Richard Münch [17]
28Thomas Pfeiffer [4] [6]
29Louchka Popova-Zeugmann [14]
30Robert Preissner [13] [16]
31Kristian Rother [13] [16]
32Andrea Sackmann [18] [21]
33Maurice Scheer [17]
34Max Schobert [17]
35Falk Schreiber [21]
36Markus Schüler [10]
37Stefan Schuster [3] [4] [6]
38Astrid Speer [20] [21]
39Thomas Steinke [13] [16]
40Silke Trißl [13] [16]
41Martin Vingron [7]
42Klaus Voss [8]
43Egon Wanke [1]
44Jürgen Will [9]
45Katja Winder [21]

Colors in the list of coauthors

Copyright © Tue Nov 3 08:52:44 2009 by Michael Ley (ley@uni-trier.de)