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Simon Kasif Vis

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*2009
55EEDikla Dotan-Cohen, Simon Kasif, Avraham A. Melkman: Seeing the forest for the trees: using the Gene Ontology to restructure hierarchical clustering. Bioinformatics 25(14): 1789-1795 (2009)
2008
54EEXiaoyu Jiang, Naoki Nariai, Martin Steffen, Simon Kasif, Eric D. Kolaczyk: Integration of relational and hierarchical network information for protein function prediction. BMC Bioinformatics 9: (2008)
2007
53EEDikla Dotan-Cohen, Avraham A. Melkman, Simon Kasif: Hierarchical tree snipping: clustering guided by prior knowledge. Bioinformatics 23(24): 3335-3342 (2007)
2006
52EENoga Alon, Vera Asodi, Charles Cantor, Simon Kasif, John Rachlin: Multi-Node Graphs: A Framework for Multiplexed Biological Assays. Journal of Computational Biology 13(10): 1659-1672 (2006)
2005
51 Satoru Miyano, Jill P. Mesirov, Simon Kasif, Sorin Istrail, Pavel A. Pevzner, Michael S. Waterman: Research in Computational Molecular Biology, 9th Annual International Conference, RECOMB 2005, Cambridge, MA, USA, May 14-18, 2005, Proceedings Springer 2005
50EEJoseph D. Szustakowski, Simon Kasif, Zhiping Weng: Less is more: towards an optimal universal description of protein folds. ECCB/JBI 2005: 71
49EEYu Zheng, Brian P. Anton, Richard J. Roberts, Simon Kasif: Phylogenetic detection of conserved gene clusters in microbial genomes. BMC Bioinformatics 6: 243 (2005)
48EEJohn Rachlin, Chunming Ding, Charles Cantor, Simon Kasif: MuPlex: multi-objective multiplex PCR assay design. Nucleic Acids Research 33(Web-Server-Issue): 544-547 (2005)
47EEChang-Jiun Wu, Simon Kasif: GEMS: a web server for biclustering analysis of expression data. Nucleic Acids Research 33(Web-Server-Issue): 596-599 (2005)
2004
46 Nathan O. Stitziel, T. Andrew Binkowski, Yan Yuan Tseng, Simon Kasif, Jie Liang: topoSNP: a topographic database of non-synonymous single nucleotide polymorphisms with and without known disease association. Nucleic Acids Research 32(Database-Issue): 520-522 (2004)
45EENoga Alon, Richard Beigel, Simon Kasif, Steven Rudich, Benny Sudakov: Learning a Hidden Matching. SIAM J. Comput. 33(2): 487-501 (2004)
2003
44EEStanley Letovsky, Simon Kasif: Predicting protein function from protein/protein interaction data: a probabilistic approach. ISMB (Supplement of Bioinformatics) 2003: 197-204
43EET. M. Murali, Simon Kasif: Extracting Conserved Gene Expression Motifs from Gene Expression Data. Pacific Symposium on Biocomputing 2003: 77-88
42 Jie Wu, Simon Kasif, Charles DeLisi: Identification of functional links between genes using phylogenetic profiles. Bioinformatics 19(12): 1524-1530 (2003)
41 Yang Su, T. M. Murali, Vladimir Pavlovic, Michael Schaffer, Simon Kasif: RankGene: identification of diagnostic genes based on expression data. Bioinformatics 19(12): 1578-1579 (2003)
2002
40EENoga Alon, Richard Beigel, Simon Kasif, Steven Rudich, Benny Sudakov: Learning a Hidden Matching. FOCS 2002: 197-
39 Vladimir Pavlovic, Ashutosh Garg, Simon Kasif: A Bayesian framework for combining gene predictions. Bioinformatics 18(1): 19-27 (2002)
2001
38EERichard Beigel, Noga Alon, Simon Kasif, Mehmet Serkan Apaydin, Lance Fortnow: An optimal procedure for gap closing in whole genome shotgun sequencing. RECOMB 2001: 22-30
2000
37 Deyou Cai, Arthur L. Delcher, Ben Kao, Simon Kasif: Modeling splice sites with Bayes networks. Bioinformatics 16(2): 152-158 (2000)
1998
36EESimon Kasif, Steven Salzberg, David L. Waltz, John Rachlin, David W. Aha: A Probabilistic Framework for Memory-Based Reasoning. Artif. Intell. 104(1-2): 287-311 (1998)
1997
35 Simon Kasif: Towards a Constraint-Based Engineering Framework for Algorithm Design and Application. Constraints 2(1): 75-82 (1997)
1996
34 Truxton Fulton, Simon Kasif, Steven Salzberg, David L. Waltz: Local Induction of Decision Trees: Towards Interactive Data Mining. KDD 1996: 14-19
33 Simon Kasif: Towards a Constraint-Based Engineering Framework for Algorithm Design and Application. ACM Comput. Surv. 28(4es): 66 (1996)
32EEArthur L. Delcher, Adam J. Grove, Simon Kasif, Judea Pearl: Logarithmic-Time Updates and Queries in Probabilistic Networks CoRR cs.AI/9602102: (1996)
31 Arthur L. Delcher, Adam J. Grove, Simon Kasif, Judea Pearl: Logarithmic-Time Updates and Queries in Probabilistic Networks. J. Artif. Intell. Res. (JAIR) 4: 37-59 (1996)
30 David G. Heath, Simon Kasif, S. Rao Kosaraju, Steven Salzberg, Gregory F. Sullivan: Learning nested concept classes with limited storage. J. Exp. Theor. Artif. Intell. 8(2): 129-147 (1996)
1995
29 Truxton Fulton, Simon Kasif, Steven Salzberg: Efficient Algorithms for Finding Multi-way Splits for Decision Trees. ICML 1995: 244-251
28EEArthur L. Delcher, Adam J. Grove, Simon Kasif, Judea Pearl: Logarithmic-Time Updates and Queries in Probabilistic Networks. UAI 1995: 116-124
27 David L. Waltz, Simon Kasif: On Reasoning From Data. ACM Comput. Surv. 27(3): 356-359 (1995)
26 Arthur L. Delcher, Simon Kasif: Term Matching on a Mesh-Connected Array of Processors. Ann. Math. Artif. Intell. 14(2-4): 177-186 (1995)
25EESteven Salzberg, Arthur L. Delcher, David G. Heath, Simon Kasif: Best-Case Results for Nearest-Neighbor Learning. IEEE Trans. Pattern Anal. Mach. Intell. 17(6): 599-608 (1995)
1994
24 Jonathan Bright, Simon Kasif, Lewis Stiller: Exploiting Algebraic Structure in Parallel State Space Search. AAAI 1994: 1341-1346
23 John Rachlin, Simon Kasif, Steven Salzberg, David W. Aha: Towards a Better Understanding of Memory-based Reasoning Systems. ICML 1994: 242-250
22 Simon Kasif, Arthur L. Delcher: Local Consistency in Parallel Constraint Satisfaction Networks. Artif. Intell. 69(1-2): 307-327 (1994)
21 Sreerama K. Murthy, Simon Kasif, Steven Salzberg: A System for Induction of Oblique Decision Trees. J. Artif. Intell. Res. (JAIR) 2: 1-32 (1994)
1993
20 Arthur L. Delcher, Simon Kasif, Harry R. Goldberg, William H. Hsu: Probabilistic Prediction of Protein Secondary Structure Using Causal Networks (Extended Abstract). AAAI 1993: 316-321
19 Sreerama K. Murthy, Simon Kasif, Steven Salzberg, Richard Beigel: OC1: A Randomized Induction of Oblique Decision Trees. AAAI 1993: 322-327
18 David G. Heath, Simon Kasif, Steven Salzberg: Induction of Oblique Decision Trees. IJCAI 1993: 1002-1007
17 Arthur L. Delcher, Simon Kasif, Harry R. Goldberg, William H. Hsu: Protein Secondary-Structure Modeling with Probabilistic Networks. ISMB 1993: 109-117
16 Simon Kasif, Arthur L. Delcher: Local Consistency in Parallel Constraint-Satisfaction Networks. PPCP 1993: 139-145
15 Simon Kasif, Saibal Banerjee, Arthur L. Delcher, Gregory F. Sullivan: Some Results on the Computational Complexity of Symmetric Connectionist Networks. Ann. Math. Artif. Intell. 9(3-4): 327-344 (1993)
14 David G. Heath, Simon Kasif: The Complexity of Finding Minimal Voronoi Covers with Applications to Machine Learning. Comput. Geom. 3: 289-305 (1993)
1992
13 Arthur L. Delcher, Simon Kasif: Improved Decision-Making in Game Trees: Recovering from Pathology. AAAI 1992: 513-518
12 Arthur L. Delcher, Simon Kasif: Efficient Parallel Term Matching and Anti-Unification. J. Autom. Reasoning 9(3): 391-406 (1992)
1991
11 Steven Salzberg, Arthur L. Delcher, David G. Heath, Simon Kasif: Learning with a Helpful Teacher. IJCAI 1991: 705-711
10 David G. Heath, Simon Kasif, S. Rao Kosaraju, Steven Salzberg, Gregory F. Sullivan: Learning Nested Concept Classes with Limited Storage. IJCAI 1991: 777-782
1990
9 Arthur L. Delcher, Simon Kasif: Efficient Parallel Term Matching and Anti-Unification. ICLP 1990: 355-369
8 Simon Kasif: On the Parallel Complexity of Discrete Relaxation in Constraint Satisfaction Networks. Artif. Intell. 45(3): 275-286 (1990)
1989
7 Simon Kasif: Parallel Solutions to Constraint Satisfaction Problems. KR 1989: 180-188
6 Arthur L. Delcher, Simon Kasif: Some Results on the Complexity of Exploiting Data Dependency in Parallel Logic Programs. J. Log. Program. 6(3): 229-241 (1989)
1986
5 Simon Kasif: On the Parallel Complexity of Some Constraint Satisfaction Problems. AAAI 1986: 349-353
1985
4 Simon Kasif, Jack Minker: The Intelligent Channel: A Scheme for Result Sharing in Logic Programs. IJCAI 1985: 29-31
1983
3 Simon Kasif, Madhur Kohli, Jack Minker: PRISM: A Parallel Inference System for Problem Solving. IJCAI 1983: 544-546
1982
2 Norbert Eisinger, Simon Kasif, Jack Minker: Logic Programming: A Parallel Approach. ICLP 1982: 71-77
1 Upen S. Chakravarthy, Simon Kasif, Madhur Kohli, Jack Minker, D. Cao: Logic Programming on ZMOB: A Highly Parallel Machine. ICPP 1982: 347-349

Coauthor Index

1David W. Aha [23] [36]
2Noga Alon [38] [40] [45] [52]
3Brian P. Anton [49]
4Mehmet Serkan Apaydin [38]
5Vera Asodi [52]
6Saibal Banerjee [15]
7Richard Beigel [19] [38] [40] [45]
8T. Andrew Binkowski [46]
9Jonathan Bright [24]
10Deyou Cai [37]
11Charles Cantor [48] [52]
12D. Cao [1]
13Upen S. Chakravarthy [1]
14Charles DeLisi [42]
15Arthur L. Delcher [6] [9] [11] [12] [13] [15] [16] [17] [20] [22] [25] [26] [28] [31] [32] [37]
16Chunming Ding [48]
17Dikla Dotan-Cohen [53] [55]
18Norbert Eisinger [2]
19Lance Fortnow [38]
20Truxton Fulton [29] [34]
21Ashutosh Garg [39]
22Harry R. Goldberg [17] [20]
23Adam J. Grove [28] [31] [32]
24David G. Heath [10] [11] [14] [18] [25] [30]
25William H. Hsu [17] [20]
26Sorin Istrail [51]
27Xiaoyu Jiang [54]
28Ben Kao (Benjamin C. M. Kao) [37]
29Madhur Kohli [1] [3]
30Eric D. Kolaczyk [54]
31S. Rao Kosaraju [10] [30]
32Stanley Letovsky (Stanley Ian Letovsky) [44]
33Jie Liang [46]
34Avraham A. Melkman [53] [55]
35Jill P. Mesirov [51]
36Jack Minker [1] [2] [3] [4]
37Satoru Miyano [51]
38T. M. Murali [41] [43]
39Sreerama K. Murthy [19] [21]
40Naoki Nariai [54]
41Vladimir Pavlovic [39] [41]
42Judea Pearl [28] [31] [32]
43Pavel A. Pevzner [51]
44John Rachlin [23] [36] [48] [52]
45Richard J. Roberts [49]
46Steven Rudich [40] [45]
47Steven Salzberg (Steven L. Salzberg) [10] [11] [18] [19] [21] [23] [25] [29] [30] [34] [36]
48Michael Schaffer [41]
49Martin Steffen [54]
50Lewis Stiller [24]
51Nathan O. Stitziel [46]
52Yang Su [41]
53Benny Sudakov [40] [45]
54Gregory F. Sullivan [10] [15] [30]
55Joseph D. Szustakowski [50]
56Yan Yuan Tseng [46]
57David L. Waltz [27] [34] [36]
58Michael S. Waterman [51]
59Zhiping Weng [50]
60Chang-Jiun Wu [47]
61Jie Wu [42]
62Yu Zheng [49]

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Copyright © Tue Nov 3 08:52:44 2009 by Michael Ley (ley@uni-trier.de)