Lawrence Hunter Vis

*	2009
70	EE	Hannah J. Tipney, Sonia M. Leach, Weiguo Feng, Richard Spritz, Trevor Williams, Lawrence Hunter: Leveraging existing biological knowledge in the identification of candidate genes for facial dysmorphology. BMC Bioinformatics 10(S-2): (2009)
69	EE	Karin Verspoor, K. Bretonnel Cohen, Lawrence Hunter: The textual characteristics of traditional and Open Access scientific journals are similar. BMC Bioinformatics 10: (2009)
68	EE	Karin Verspoor, Daniel Dvorkin, K. Bretonnel Cohen, Lawrence Hunter: Ontology quality assurance through analysis of term transformations. Bioinformatics 25(12): (2009)
67	EE	Yoshinobu Kano, William A. Baumgartner Jr., Luke McCrohon, Sophia Ananiadou, K. Bretonnel Cohen, Lawrence Hunter, Jun-ichi Tsujii: U-Compare: share and compare text mining tools with UIMA. Bioinformatics 25(15): 1997-1998 (2009)
66	EE	Edward H. Shortliffe, Andrea Califano, Lawrence Hunter: New JBI emphasis on translational bioinformatics. Journal of Biomedical Informatics 42(2): 199-200 (2009)
	2008
65		Russ B. Altman, A. Keith Dunker, Lawrence Hunter, Tiffany Murray, Teri E. Klein: Biocomputing 2008, Proceedings of the Pacific Symposium, Kohala Coast, Hawaii, USA, 4-8 January 2008 World Scientific 2008
64	EE	Michael Bada, Chris Mungall, Lawrence Hunter: A Call for an Abductive Reasoning Feature in OWL-Reasoning Tools toward Ontology Quality Control. OWLED 2008
63	EE	J. Gregory Caporaso, Nita Deshpande, J. Lynn Fink, Philip E. Bourne, K. Bretonnel Cohen, Lawrence Hunter: Intrinsic Evaluation of Text Mining Tools May Not Predict Performance on Realistic Tasks. Pacific Symposium on Biocomputing 2008: 640-651
62	EE	Aaron Gabow, Sonia M. Leach, William A. Baumgartner Jr., Lawrence Hunter, Debra Goldberg: Improving protein function prediction methods with integrated literature data. BMC Bioinformatics 9: (2008)
61	EE	Lawrence Hunter, Zhiyong Lu, James Firby, William A. Baumgartner Jr., Helen L. Johnson, Philip V. Ogren, K. Bretonnel Cohen: OpenDMAP: An open source, ontology-driven concept analysis engine, with applications to capturing knowledge regarding protein transport, protein interactions and cell-type-specific gene expression. BMC Bioinformatics 9: (2008)
60	EE	Anis Karimpour-Fard, Sonia M. Leach, Ryan T. Gill, Lawrence Hunter: Predicting protein linkages in bacteria: Which method is best depends on task. BMC Bioinformatics 9: (2008)
59	EE	Steven Bethard, Zhiyong Lu, James H. Martin, Lawrence Hunter: Semantic role labeling for protein transport predicates. BMC Bioinformatics 9: (2008)
58	EE	Michael Bada, Lawrence Hunter: Identification of OBO nonalignments and its implications for OBO enrichment. Bioinformatics 24(12): 1448-1455 (2008)
	2007
57		Russ B. Altman, A. Keith Dunker, Lawrence Hunter, Tiffany Murray, Teri E. Klein: Biocomputing 2007, Proceedings of the Pacific Symposium, Maui, Hawaii, USA, 3-7 January 2007 World Scientific 2007
56	EE	Hyunmin Kim, Katherina J. Kechris, Lawrence Hunter: Mining Discriminative Distance Context of Transcription Factor Binding Sites on ChIP Enriched Regions. ISBRA 2007: 338-349
55	EE	William A. Baumgartner Jr., K. Bretonnel Cohen, Lynne M. Fox, George Acquaah-Mensah, Lawrence Hunter: Manual curation is not sufficient for annotation of genomic databases. ISMB/ECCB (Supplement of Bioinformatics) 2007: 41-48
54	EE	Helen L. Johnson, K. Bretonnel Cohen, Lawrence Hunter: A Fault Model for Ontology Mapping, Alignment, and Linking Systems. Pacific Symposium on Biocomputing 2007: 233-268
53	EE	Zhiyong Lu, K. Bretonnel Cohen, Lawrence Hunter: Generif Quality Assurance as Summary Revision. Pacific Symposium on Biocomputing 2007: 269-280
52	EE	Sonia M. Leach, Aaron Gabow, Lawrence Hunter, Debra Goldberg: Assessing and Combining Reliability of Protein Interaction Sources. Pacific Symposium on Biocomputing 2007: 433-444
51	EE	J. Gregory Caporaso, William A. Baumgartner Jr., David A. Randolph, K. Bretonnel Cohen, Lawrence Hunter: MutationFinder: a high-performance system for extracting point mutation mentions from text. Bioinformatics 23(14): 1862-1865 (2007)
50	EE	J. Gregory Caporaso, William A. Baumgartner Jr., David A. Randolph, K. Bretonnel Cohen, Lawrence Hunter: Rapid Pattern Development for Concept Recognition Systems: Application to Point mutations. J. Bioinformatics and Computational Biology 5(6): 1233-1259 (2007)
49	EE	Michael Bada, Lawrence Hunter: Enrichment of OBO ontologies. Journal of Biomedical Informatics 40(3): 300-315 (2007)
	2006
48		Russ B. Altman, Tiffany Murray, Teri E. Klein, A. Keith Dunker, Lawrence Hunter: Biocomputing 2006, Proceedings of the Pacific Symposium, Maui, Hawaii, USA, 3-7 January 2006 World Scientific 2006
47	EE	Helen L. Johnson, K. Bretonnel Cohen, William A. Baumgartner Jr., Zhiyong Lu, Michael Bada, Todd Kester, Hyunmin Kim, Lawrence Hunter: Evaluation of Lexical Methods for Detecting Relationships Between Concepts from Multiple Ontologies. Pacific Symposium on Biocomputing 2006: 28-39
46	EE	Zhiyong Lu, K. Bretonnel Cohen, Lawrence Hunter: Finding GeneRIFs via Gene Ontology Annotations. Pacific Symposium on Biocomputing 2006: 52-63
45	EE	J. Gregory Caporaso, William A. Baumgartner Jr., Hyunmin Kim, Zhiyong Lu, Helen L. Johnson, Olga Medvedeva, Anna Lindemann, Lynne M. Fox, Elizabeth K. White, K. Bretonnel Cohen, Lawrence Hunter: Concept Recognition, Information Retrieval, and Machine Learning in Genomics Question-Answering. TREC 2006
44	EE	K. Bretonnel Cohen, Lawrence Hunter: A critical review of PASBio's argument structures for biomedical verbs. BMC Bioinformatics 7(S-3): (2006)
	2005
43		Russ B. Altman, Tiffany A. Jung, Teri E. Klein, A. Keith Dunker, Lawrence Hunter: Biocomputing 2005, Proceedings of the Pacific Symposium, Hawaii, USA, 4-8 January 2005 World Scientific 2005
42	EE	Z. Lu, Lawrence Hunter: GO Molecular Function Terms Are Predictive of Subcellular Localization. Pacific Symposium on Biocomputing 2005
41	EE	Philip V. Ogren, K. Bretonnel Cohen, Lawrence Hunter: Implications of Compositionality in the Gene Ontology for Its Curation and Usage . Pacific Symposium on Biocomputing 2005
40	EE	Russ B. Altman, A. Keith Dunker, Lawrence Hunter, Teri E. Klein: Preface. Pacific Symposium on Biocomputing 2005
39	EE	J. Gregory Caporaso, William A. Baumgartner Jr., K. Bretonnel Cohen, Helen L. Johnson, Jesse Paquette, Lawrence Hunter: Concept Recognition and the TREC Genomics Tasks. TREC 2005
38	EE	Shuhei Kinoshita, K. Bretonnel Cohen, Philip V. Ogren, Lawrence Hunter: BioCreAtIvE Task1A: entity identification with a stochastic tagger. BMC Bioinformatics 6(S-1): (2005)
	2004
37		Russ B. Altman, A. Keith Dunker, Lawrence Hunter, Tiffany A. Jung, Teri E. Klein: Biocomputing 2004, Proceedings of the Pacific Symposium, Hawaii, USA, 6-10 January 2004 World Scientific 2004
36	EE	Min Hong, Anis Kairmpour-fard, Steve Russell, Lawrence Hunter: Integrated Term Weighting, Visualization, and User Interface Development for Bioinformation Retrieval. AIS 2004: 673-682
35	EE	Russ B. Altman, A. Keith Dunker, Lawrence Hunter, Teri E. Klein: Preface. Pacific Symposium on Biocomputing 2004
34	EE	Philip V. Ogren, K. Bretonnel Cohen, George Acquaah-Mensah, Jens Eberlein, Lawrence Hunter: The Compositional Structure of Gene Ontology Terms. Pacific Symposium on Biocomputing 2004: 214-225
33		Lawrence Hunter: Life and Its Molecules: A Brief Introduction. AI Magazine 25(1): 9-22 (2004)
	2003
32	EE	Russ B. Altman, A. Keith Dunker, Lawrence Hunter, Teri E. Klein: Preface. Pacific Symposium on Biocomputing 2003
31	EE	Tzu L. Phang, Margaret C. Neville, Michael Rudolph, Lawrence Hunter: Trajectory Clustering: A Non-Parametric Method for Grouping Gene Expression Time Courses with Applications to Mammary Development. Pacific Symposium on Biocomputing 2003: 351-362
30	EE	Russ B. Altman, A. Keith Dunker, Lawrence Hunter, Teri E. Klein: Special Paper - Introduction. Pacific Symposium on Biocomputing 2003: 636-637
29	EE	Eric W. Brown, Andrew Dolbey, Lawrence Hunter: IBM Research and the University of Colorado - TREC 2003 Genomics Track. TREC 2003: 268-275
	2002
28		K. Bretonnel Cohen, Andrew Dolbey, George Acquaah-Mensah, Lawrence Hunter: Contrast and variability in gene names. ACL Workshop on Natural Language Processing in the Biomedical Domain 2002: 14-20
27	EE	Russ B. Altman, A. Keith Dunker, Lawrence Hunter, Teri E. Klein: Preface. Pacific Symposium on Biocomputing 2002
26		Mary E. Edgerton, Ronald C. Taylor, John I. Powell, Lawrence Hunter, Richard Simon, Edison T. Liu: A bioinformatics tool to select sequences for microarray studies of mouse models of oncogenesis. Bioinformatics 18(5): 774-775 (2002)
25	EE	Lawrence Hunter, Richard H. Lathrop: Guest Editors' Introduction-Computer Science and Biology: An Unlikely Pair. IEEE Intelligent Systems 17(2): 8-10 (2002)
	2001
24		Lawrence Hunter, Ronald C. Taylor, Sonia M. Leach, Richard Simon: GEST: a gene expression search tool based on a novel Bayesian similarity metric. ISMB (Supplement of Bioinformatics) 2001: 115-122
	2000
23	EE	Thomas C. Rindflesch, Jayant V. Rajan, Lawrence Hunter: Extracting Molecular Binding Relationships from Biomedical Text. ANLP 2000: 188-195
	1999
22		Sonia M. Leach, Lawrence Hunter, David Landsman: Comparison of Clustering Metrics and Unsupervised Learning Algorithms on Genome-Wide Gene Expression Level Data. AAAI/IAAI 1999: 966
	1998
21		Imran Shah, Lawrence Hunter: Identification of Divergent Functions in Homologous Proteins by Induction over Conserved Modules. ISMB 1998: 157-164
	1997
20		Lawrence Hunter, Barry Zeeberg: Identifying Chimerism in Proteins Using Hidden Markov Models of Codon Usage. ISMB 1997: 153-156
19		Imran Shah, Lawrence Hunter: Predicting Enzyme Function from Sequence: A Systematic Appraisal. ISMB 1997: 276-283
18	EE	Jeffrey L. Krichmar, Giorgio A. Ascoli, Lawrence Hunter, James L. Olds: A Model of Cerebellar Saccadic Motor Learning Using Qualitative Reasoning. IWANN 1997: 133-145
	1996
17		David J. States, Pankaj Agarwal, Terry Gaasterland, Lawrence Hunter, Randall Smith: Proceedings of the Fourth International Conference on Intelligent Systems for Molecular Biology, St. Louis, MO, USA, June 12-15 1996 AAAI 1996
	1995
16		Christopher J. Rawlings, Dominic A. Clark, Russ B. Altman, Lawrence Hunter, Thomas Lengauer, Shoshana J. Wodak: Proceedings of the Third International Conference on Intelligent Systems for Molecular Biology, Cambridge, United Kingdom, July 16-19, 1995 AAAI 1995
15		Jude W. Shavlik, Lawrence Hunter, David B. Searls: Introduction. Machine Learning 21(1-2): 5-9 (1995)
	1994
14		David B. Searls, Jude W. Shavlik, Lawrence Hunter: The First International Conference on Intelligent Systems for Molecular Biology. AI Magazine 15(1): 12-13 (1994)
	1993
13		Lawrence Hunter, David B. Searls, Jude W. Shavlik: Proceedings of the 1st International Conference on Intelligent Systems for Molecular Biology, Bethesda, MD, USA, July 1993 AAAI 1993
12		Hiroaki Kitano, Walther von Hahn, Lawrence Hunter, Ryuichi Oka, Benjamin W. Wah, Toshio Yokoi: Grand Challenge AI Applications. IJCAI 1993: 1677-1683
11		Lawrence Hunter, Teri E. Klein: Finding Relevant Biomolecular Features. ISMB 1993: 190-197
10		David J. States, Nomi L. Harris, Lawrence Hunter: Computationally Efficient Cluster Representation in Molecular Sequence Megaclassification. ISMB 1993: 387-394
	1992
9		Nomi L. Harris, Lawrence Hunter, David J. States: Mega-Classification: Discovering Motifs in Massive Datastreams. AAAI 1992: 837-842
8		Lawrence Hunter: Artificial Intelligence and Molecular Biology. AAAI 1992: 866-868
7		Lawrence Hunter, Nomi L. Harris, David J. States: Efficient Classification of Massive, Unsegmented Datastreams. ML 1992: 224-232
6	EE	Ashwin Ram, Lawrence Hunter: The use of explicit goals for knowledge to guide inference and learning. Appl. Intell. 2(1): 47-73 (1992)
5	EE	Lawrence Hunter, David J. States: Bayesian Classification of Protein Structure. IEEE Expert 7(4): 67-75 (1992)
	1991
4		Ashwin Ram, Lawrence Hunter: A Goal-Based Approach to Intelligent Information Retrieval. ML 1991: 265-269
3		Lawrence Hunter: Artificial Intelligence and Molecular Biology. AI Magazine 11(5): 27-36 (1991)
	1989
2		Lawrence Hunter: Knowledge Acquisition Planning: Results and Prospects. ML 1989: 61-65
	1988
1		Lawrence Hunter: Estimating Human Cognitive Capacities: A Response to Landauer. Cognitive Science 12(2): 287-291 (1988)

Coauthor Index

1	George Acquaah-Mensah	[28] [34] [55]
2	Pankaj Agarwal	[17]
3	Russ B. Altman	[16] [27] [30] [32] [35] [37] [40] [43] [48] [57] [65]
4	Sophia Ananiadou	[67]
5	Giorgio A. Ascoli	[18]
6	Michael Bada	[47] [49] [58] [64]
7	William A. Baumgartner Jr.	[39] [45] [47] [50] [51] [55] [61] [62] [67]
8	Steven Bethard	[59]
9	Philip E. Bourne	[63]
10	Eric W. Brown	[29]
11	Andrea Califano	[66]
12	J. Gregory Caporaso	[39] [45] [50] [51] [63]
13	Dominic A. Clark	[16]
14	K. Bretonnel Cohen	[28] [34] [38] [39] [41] [44] [45] [46] [47] [50] [51] [53] [54] [55] [61] [63] [67] [68] [69]
15	Nita Deshpande	[63]
16	Andrew Dolbey	[28] [29]
17	A. Keith Dunker	[27] [30] [32] [35] [37] [40] [43] [48] [57] [65]
18	Daniel Dvorkin	[68]
19	Jens Eberlein	[34]
20	Mary E. Edgerton	[26]
21	Weiguo Feng	[70]
22	J. Lynn Fink	[63]
23	James Firby	[61]
24	Lynne M. Fox	[45] [55]
25	Terry Gaasterland	[17]
26	Aaron Gabow	[52] [62]
27	Ryan T. Gill	[60]
28	Debra Goldberg	[52] [62]
29	Walther von Hahn	[12]
30	Nomi L. Harris	[7] [9] [10]
31	Min Hong	[36]
32	Helen L. Johnson	[39] [45] [47] [54] [61]
33	Anis Kairmpour-fard	[36]
34	Yoshinobu Kano	[67]
35	Anis Karimpour-Fard	[60]
36	Katherina J. Kechris	[56]
37	Todd Kester	[47]
38	Hyunmin Kim	[45] [47] [56]
39	Shuhei Kinoshita	[38]
40	Hiroaki Kitano	[12]
41	Teri E. Klein	[11] [27] [30] [32] [35] [37] [40] [43] [48] [57] [65]
42	Jeffrey L. Krichmar	[18]
43	David Landsman	[22]
44	Richard H. Lathrop	[25]
45	Sonia M. Leach	[22] [24] [52] [60] [62] [70]
46	Thomas Lengauer	[16]
47	Anna Lindemann	[45]
48	Edison T. Liu	[26]
49	Z. Lu	[42]
50	Zhiyong Lu	[45] [46] [47] [53] [59] [61]
51	James H. Martin	[59]
52	Luke McCrohon	[67]
53	Olga Medvedeva	[45]
54	Chris Mungall	[64]
55	Tiffany Murray (Tiffany A. Jung)	[37] [43] [48] [57] [65]
56	Margaret C. Neville	[31]
57	Philip V. Ogren	[34] [38] [41] [61]
58	Ryuichi Oka	[12]
59	James L. Olds	[18]
60	Jesse Paquette	[39]
61	Tzu L. Phang	[31]
62	John I. Powell	[26]
63	Jayant V. Rajan	[23]
64	Ashwin Ram	[4] [6]
65	David A. Randolph	[50] [51]
66	Christopher J. Rawlings	[16]
67	Thomas C. Rindflesch	[23]
68	Michael Rudolph	[31]
69	Steve Russell	[36]
70	David B. Searls	[13] [14] [15]
71	Imran Shah	[19] [21]
72	Jude W. Shavlik	[13] [14] [15]
73	Edward H. Shortliffe	[66]
74	Richard Simon	[24] [26]
75	Randall Smith	[17]
76	Richard Spritz	[70]
77	David J. States	[5] [7] [9] [10] [17]
78	Ronald C. Taylor	[24] [26]
79	Hannah J. Tipney	[70]
80	Jun-ichi Tsujii	[67]
81	Karin Verspoor	[68] [69]
82	Benjamin W. Wah	[12]
83	Elizabeth K. White	[45]
84	Trevor Williams	[70]
85	Shoshana J. Wodak	[16]
86	Toshio Yokoi	[12]
87	Barry Zeeberg	[20]

Colors in the list of coauthors