Youping Deng Vis

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31 Alexander Pozhikov, Mehdi Pirooznia, Rachel Ryan, Chaoyang Zhang, Ping Gong, Edward J. Perkins, Youping Deng, Marius Brouwer: Generation and Analysis of Expressed Sequence Tags from the Sheepshead Minnow (Cyprinodon Variegatus). BIOCOMP 2009: 174-180
30 Mehdi Pirooznia, Douglas Crawford, Jeffrey Vanwye, Russell Gibson, Chaoyang Zhang, Youping Deng, Timothy McLean: Genomic Resources for Karenia brevis. BIOCOMP 2009: 228-234
29 Jinghe Mao, Ming Shenwu, Marketta Blue, Manuel Ong, Mary Roth, Ruth Welti, Youping Deng: Plasma Lipidomic Profiling Reveals the Potential Biomarkers in Type 2 Diabetic Patients. BIOCOMP 2009: 774-779
28 Ping Gong, Mehdi Pirooznia, Xin Guan, J. Cristobal Vera, Chun Liang, Youping Deng, Chaoyang Zhang, Edward J. Perkins: A Strategy for High Throughput Microarray Oligo Probe Design Using 454 and Sanger Sequencing Data of Eisenia fetida Expressed Sequence Tags. BIOCOMP 2008: 1040-1043
27 Peng Li, Chaoyang Zhang, Edward J. Perkins, Ping Gong, Youping Deng: Inferring Gene Regulatory Network of Yeast Cell-Cycle using Dynamic Bayesian Network. BIOCOMP 2008: 801-805
26 Mehdi Pirooznia, Ping Gong, Chaoyang Zhang, Edward J. Perkins, Youping Deng: Creating a Workflow for Expressed Sequence Tags Analysis. BIOCOMP 2008: 806-808
25EEArun Rawat, Georg J. Seifert, Youping Deng: Novel implementation of conditional co-regulation by graph theory to derive co-expressed genes from microarray data. BMC Bioinformatics 9(S-9): (2008)
24EEMehdi Pirooznia, Tanwir Habib, Edward J. Perkins, Youping Deng: GOfetcher: a database with complex searching facility for gene ontology. Bioinformatics 24(21): 2561-2563 (2008)
23EEMehdi Pirooznia, Youping Deng: Efficiency of Hybrid Normalization of Microarray Gene Expression: A Simulation Study. AINA Workshops (1) 2007: 739-744
22EEMehdi Pirooznia, Arun Rawat, Jack Y. Yang, Mary Qu Yang, Ping Gong, Edward J. Perkins, Youping Deng: An Effective Interwoven Loop Design Application for Two-Channel Microarray Experiments. BIBE 2007: 187-191
21EEJack Y. Yang, Andrzej Niemierko, Mary Qu Yang, Youping Deng: Non-Monotonic Radio-Sensitivity over Tumor Volumes on Adjuvant Radio Therapy A New Insight on Cell Killing and Modeling. BIBE 2007: 524-531
20 Chaoyang Zhang, Surender Dargan, Hong Lan, Youping Deng: Web-Based Information Retrieval with Local and Global Link Analyis. IKE 2007: 117-123
19 Arun Rajendran, Peng Li, Chaoyang Zhang, Youping Deng: Parallel Training of Multi-class Support Vector Machines Using Sequential Minimal Optimization. MLMTA 2007: 31-37
18EEMehdi Pirooznia, Ping Gong, Xin Guan, Laura S. Inouye, Kuan Yang, Edward J. Perkins, Youping Deng: Cloning, analysis and functional annotation of expressed sequence tags from the Earthworm Eisenia fetida. BMC Bioinformatics 8(S-7): (2007)
17EEPeng Li, Chaoyang Zhang, Edward J. Perkins, Ping Gong, Youping Deng: Comparison of probabilistic Boolean network and dynamic Bayesian network approaches for inferring gene regulatory networks. BMC Bioinformatics 8(S-7): (2007)
16EEYouping Deng, Yinghua Dong, Susan J. Brown, Chaoyang Zhang: An Integrated Web-Based Model for Management, Analysis and Retrieval of EST Biological Information. APWeb Workshops 2006: 931-938
15EEChaoyang Zhang, Peng Li, Arun Rajendran, Youping Deng: Parallel Multicategory Support Vector Machines (PMC-SVM) for Classifying Microcarray Data. IMSCCS (1) 2006: 110-115
14EEKuan Yang, Youping Deng, Chaoyang Zhang, Mohamed O. Elasri: Identification of New Members of Hydrophobin Family Using Primary Structure Analysis. IMSCCS (1) 2006: 116-122
13EEVijayaraj Nagarajan, Navodit Kaushik, Beddhu Murali, Chaoyang Zhang, Sanyogita Lakhera, Mohamed O. Elasri, Youping Deng: A Fourier Transformation based Method to Mine Peptide Space for Antimicrobial Activity. BMC Bioinformatics 7(S-2): (2006)
12EEVenkata Thodima, Mehdi Pirooznia, Youping Deng: RiboaptDB: A Comprehensive Database of Ribozymes and Aptamers. BMC Bioinformatics 7(S-2): (2006)
11EEYouping Deng, Jun Ni, Chaoyang Zhang: Development of computations in bioscience and bioinformatics and its application: review of the Symposium of Computations in Bioinformatics and Bioscience (SCBB06). BMC Bioinformatics 7(S-4): (2006)
10EEKuan Yang, Youping Deng, Chaoyang Zhang, Mohamed O. Elasri: Identification of new members of hydrophobin family using primary structure analysis. BMC Bioinformatics 7(S-4): (2006)
9EEChaoyang Zhang, Peng Li, Arun Rajendran, Youping Deng, Dequan Chen: Parallelization of multicategory support vector machines (PMC-SVM) for classifying microarray data. BMC Bioinformatics 7(S-4): (2006)
8EEMehdi Pirooznia, Youping Deng: SVM Classifier - a comprehensive java interface for support vector machine classification of microarray data. BMC Bioinformatics 7(S-4): (2006)
7EEYouping Deng, Venkatachalam Chokalingam, Chaoyang Zhang: Markov Chain Correlation Based Clustering of Gene Expression Data. ITCC (2) 2005: 750-755
6 Navodit Kaushik, Chaoyang Zhang, Beddhu Murali, Vijayaraj Nagarajan, Sanyogita Lakhera, Youping Deng: Parallel Virtual Screening for Prediction of Antimicrobial Activity Using Fourier Transforms. PDPTA 2005: 1355-
5EEJudong Shen, Shing I. Chang, E. Stanley Lee, Youping Deng, Susan J. Brown: Determination of cluster number in clustering microarray data. Applied Mathematics and Computation 169(2): 1172-1185 (2005)
4EEYi Lu, Shiyong Lu, Farshad Fotouhi, Youping Deng, Susan J. Brown: FGKA: a Fast Genetic K-means Clustering Algorithm. SAC 2004: 622-623
3EEYi Lu, Shiyong Lu, Farshad Fotouhi, Youping Deng, Susan J. Brown: Incremental genetic K-means algorithm and its application in gene expression data analysis. BMC Bioinformatics 5: 172 (2004)
2EEHongying Jiang, Youping Deng, Huann-Sheng Chen, Lin Tao, Qiuying Sha, Jun Chen, Chung-Jui Tsai, Shuanglin Zhang: Joint analysis of two microarray gene-expression data sets to select lung adenocarcinoma marker genes. BMC Bioinformatics 5: 81 (2004)
1EEQingsong Zhu, Youping Deng, Phaneendra Vanka, Susan J. Brown, Subbaratnam Muthukrishnan, Karl J. Kramer: Computational identification of novel chitinase-like proteins in the Drosophila melanogaster genome. Bioinformatics 20(2): 161-169 (2004)

Coauthor Index

1Marketta Blue [29]
2Marius Brouwer [31]
3Susan J. Brown [1] [3] [4] [5] [16]
4Shing I. Chang [5]
5Dequan Chen [9]
6Huann-Sheng Chen [2]
7Jun Chen [2]
8Venkatachalam Chokalingam [7]
9Douglas Crawford [30]
10Surender Dargan [20]
11Yinghua Dong [16]
12Mohamed O. Elasri [10] [13] [14]
13Farshad Fotouhi [3] [4]
14Russell Gibson [30]
15Ping Gong [17] [18] [22] [26] [27] [28] [31]
16Xin Guan [18] [28]
17Tanwir Habib [24]
18Laura S. Inouye [18]
19Hongying Jiang [2]
20Navodit Kaushik [6] [13]
21Karl J. Kramer [1]
22Sanyogita Lakhera [6] [13]
23Hong Lan [20]
24E. Stanley Lee [5]
25Peng Li [9] [15] [17] [19] [27]
26Chun Liang [28]
27Shiyong Lu [3] [4]
28Yi Lu [3] [4]
29Jinghe Mao [29]
30Timothy McLean [30]
31Beddhu Murali [6] [13]
32Subbaratnam Muthukrishnan [1]
33Vijayaraj Nagarajan [6] [13]
34Jun Ni [11]
35Andrzej Niemierko [21]
36Manuel Ong [29]
37Edward J. Perkins [17] [18] [22] [24] [26] [27] [28] [31]
38Mehdi Pirooznia [8] [12] [18] [22] [23] [24] [26] [28] [30] [31]
39Alexander Pozhikov [31]
40Arun Rajendran [9] [15] [19]
41Arun Rawat [22] [25]
42Mary Roth (Mary Tork Roth) [29]
43Rachel Ryan [31]
44Georg J. Seifert [25]
45Qiuying Sha [2]
46Judong Shen [5]
47Ming Shenwu [29]
48Lin Tao [2]
49Venkata Thodima [12]
50Chung-Jui Tsai [2]
51Phaneendra Vanka [1]
52Jeffrey Vanwye [30]
53J. Cristobal Vera [28]
54Ruth Welti [29]
55Jack Y. Yang [21] [22]
56Kuan Yang [10] [14] [18]
57Mary Qu Yang [21] [22]
58Chaoyang Zhang [6] [7] [9] [10] [11] [13] [14] [15] [16] [17] [19] [20] [26] [27] [28] [30] [31]
59Shuanglin Zhang [2]
60Qingsong Zhu [1]

Colors in the list of coauthors

Copyright © Tue Nov 3 08:52:44 2009 by Michael Ley (ley@uni-trier.de)