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Vladimir Brusic Vis

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*2009
42EEFrancesco Pappalardo, Mark D. Halling-Brown, Nicolas Rapin, Ping Zhang, Davide Alemani, Andrew Emerson, Paola Paci, Patrice Duroux, Marzio Pennisi, Arianna Palladini, Olivo Miotto, Daniel Churchill, Elda Rossi, Adrian J. Shepherd, David S. Moss, Filippo Castiglione, Massimo Bernaschi, Marie-Paule Lefranc, Søren Brunak, Santo Motta, Pierluigi Lollini, Kaye E. Basford, Vladimir Brusic: ImmunoGrid, an integrative environment for large-scale simulation of the immune system for vaccine discovery, design and optimization. Briefings in Bioinformatics 10(3): 330-340 (2009)
2008
41EEPing Zhang, Vladimir Brusic, Kaye E. Basford: A Hybrid Model for Prediction of Peptide Binding to MHC Molecules. ICONIP (1) 2008: 529-536
40EEGuanglan Zhang, Asif M. Khan, Kellathur N. Srinivasan, A. T. Heiny, Kenneth X. Lee, Chee Keong Kwoh, J. Thomas August, Vladimir Brusic: Hotspot Hunter: a computational system for large-scale screening and selection of candidate immunological hotspots in pathogen proteomes. BMC Bioinformatics 9(S-1): (2008)
39EEOlivo Miotto, A. T. Heiny, Tin Wee Tan, J. Thomas August, Vladimir Brusic: Identification of human-to-human transmissibility factors in PB2 proteins of influenza A by large-scale mutual information analysis. BMC Bioinformatics 9(S-1): (2008)
38EEOlivo Miotto, Tin Wee Tan, Vladimir Brusic: Rule-based knowledge aggregation for large-scale protein sequence analysis of influenza A viruses. BMC Bioinformatics 9(S-1): (2008)
37EEHong Huang Lin, Guanglan Zhang, Songsak Tongchusak, Ellis L. Reinherz, Vladimir Brusic: Evaluation of MHC-II peptide binding prediction servers: applications for vaccine research. BMC Bioinformatics 9(S-12): (2008)
36EEVladimir Brusic, Shoba Ranganathan: Critical technologies for bioinformatics. Briefings in Bioinformatics 9(4): 261-262 (2008)
2007
35EELiwen You, Ping Zhang, Mikael Bodén, Vladimir Brusic: Understanding Prediction Systems for HLA-Binding Peptides and T-Cell Epitope Identification. PRIB 2007: 337-348
34EEMenaka Rajapakse, Bertil Schmidt, Lin Feng, Vladimir Brusic: Predicting peptides binding to MHC class II molecules using multi-objective evolutionary algorithms. BMC Bioinformatics 8: (2007)
33EEVladimir Brusic: The growth of bioinformatics. Briefings in Bioinformatics 8(2): 69-70 (2007)
2006
32EEMenaka Rajapakse, Bertil Schmidt, Vladimir Brusic: Multi-Objective Evolutionary Algorithm for Discovering Peptide Binding Motifs. EvoWorkshops 2006: 149-158
31EESeng Hong Seah, Chee Keong Kwoh, Vladimir Brusic, Meena Kishore Sakharkar, Geok See Ng: Functional Prediction of Snake Neurotoxins. ICARCV 2006: 1-4
30EEStephanus Daniel Handoko, Chee Keong Kwoh, Yew-Soon Ong, Guanglan Zhang, Vladimir Brusic: Extreme Learning Machine for Predicting HLA-Peptide Binding. ISNN (2) 2006: 716-721
29EEKai-Tak Lam, Judice L. Y. Koh, Bharadwaj Veeravalli, Vladimir Brusic: Incremental Maintenance of Biological Databases Using Association Rule Mining. PRIB 2006: 140-150
28EEAsif M. Khan, A. T. Heiny, Kenneth X. Lee, Kellathur N. Srinivasan, Tin Wee Tan, J. Thomas August, Vladimir Brusic: Large-scale analysis of antigenic diversity of T-cell epitopes in dengue virus. BMC Bioinformatics 7(S-5): (2006)
27EEJoo Chuan Tong, Guanglan Zhang, Tin Wee Tan, J. Thomas August, Vladimir Brusic, Shoba Ranganathan: Prediction of HLA-DQ3.2ß Ligands: evidence of multiple registers in class II binding peptides. Bioinformatics 22(10): 1232-1238 (2006)
2005
26EEIvana Bozic, Guanglan Zhang, Vladimir Brusic: Predictive Vaccinology: Optimisation of Predictions Using Support Vector Machine Classifiers. IDEAL 2005: 375-381
25EEOlivo Miotto, Tin Wee Tan, Vladimir Brusic: Extraction by Example: Induction of Structural Rules for the Analysis of Molecular Sequence Data from Heterogeneous Sources. IDEAL 2005: 398-405
24EEMenaka Rajapakse, Lonce L. Wyse, Bertil Schmidt, Vladimir Brusic: Deriving Matrix of Peptide-MHC Interactions in Diabetic Mouse by Genetic Algorithm. IDEAL 2005: 440-447
23EEGuanglan Zhang, Asif M. Khan, Kellathur N. Srinivasan, J. Thomas August, Vladimir Brusic: Neural Models for Predicting Viral Vaccine Targets. J. Bioinformatics and Computational Biology 3(5): 1207-1226 (2005)
22EEGuanglan Zhang, Asif M. Khan, Kellathur N. Srinivasan, J. Thomas August, Vladimir Brusic: MULTIPRED: a computational system for prediction of promiscuous HLA binding peptides. Nucleic Acids Research 33(Web-Server-Issue): 172-179 (2005)
21EEGuanglan Zhang, Kellathur N. Srinivasan, Anitha Veeramani, J. Thomas August, Vladimir Brusic: PREDBALB/c: a system for the prediction of peptide binding to H2d molecules, a haplotype of the BALB/c mouse. Nucleic Acids Research 33(Web-Server-Issue): 180-183 (2005)
2004
20EEKellathur N. Srinivasan, Guanglan Zhang, Asif M. Khan, J. Thomas August, Vladimir Brusic: Prediction of class I T-cell epitopes: evidence of presence of immunological hot spots inside antigens. ISMB/ECCB (Supplement of Bioinformatics) 2004: 297-302
19EEJoyce Phui Yee Siew, Asif M. Khan, Paul T. J. Tan, Judice L. Y. Koh, Seng Hong Seah, Chuay Yeng Koo, Siaw Ching Chai, Arunmozhiarasi Armugam, Vladimir Brusic, Kandiah Jeyaseelan: Systematic analysis of snake neurotoxins' functional classification using a data warehousing approach. Bioinformatics 20(18): 3466-3480 (2004)
18 Manisha Brahmachary, S. P. T. Krishnan, Judice L. Y. Koh, Asif M. Khan, Seng Hong Seah, Tin Wee Tan, Vladimir Brusic, Vladimir B. Bajic: ANTIMIC: a database of antimicrobial sequences. Nucleic Acids Research 32(Database-Issue): 586-589 (2004)
17 Johann Lenffer, Paulo Lai, Wafaa El Mejaber, Asif M. Khan, Judice L. Y. Koh, Paul T. J. Tan, Seng Hong Seah, Vladimir Brusic: CysView: protein classification based on cysteine pairing patterns. Nucleic Acids Research 32(Web-Server-Issue): 350-355 (2004)
2003
16EEVladimir B. Bajic, Vladimir Brusic, Jinyan Li, See-Kiong Ng, Limsoon Wong: From Informatics to Bioinformatics. APBC 2003: 3-12
15 Paul T. J. Tan, Asif M. Khan, Vladimir Brusic: Bioinformatics for Venom and Toxin Sciences. Briefings in Bioinformatics 4(1): 53-62 (2003)
14EENikolai Petrovsky, Christian Schönbach, Vladimir Brusic: Bioinformatic strategies for better understanding of immune function. In Silico Biology 3: 34 (2003)
13EEVladimir Brusic: From Immunoinformatics to Immunomics. J. Bioinformatics and Computational Biology 1(1): 179-182 (2003)
2002
12 Vladimir B. Bajic, Seng Hong Seah, Allen Chong, Guanglan Zhang, Judice L. Y. Koh, Vladimir Brusic: Dragon Promoter Finder: recognition of vertebrate RNA polymerase II promoters. Bioinformatics 18(1): 198-199 (2002)
11EEVladimir B. Bajic, Allen Chong, Seng Hong Seah, Vladimir Brusic: An Intelligent System for Vertebrate Promoter Recognition. IEEE Intelligent Systems 17(4): 64-70 (2002)
10 Vladimir B. Bajic, Suisheng Tang, Hao Han, Vladimir Brusic, Artemis G. Hatzigeorgiou: Artificial Neural Networks Based Systems for Recognition of Genomic Signals and Regions: A Review. Informatica (Slovenia) 26(4): (2002)
9 Christian Schönbach, Judice L. Y. Koh, Darren R. Flower, Limsoon Wong, Vladimir Brusic: FIMM, a database of functional molecular immunology: update 2002. Nucleic Acids Research 30(1): 226-229 (2002)
2000
8 Christian Schönbach, P. Kowalski-Saunders, Vladimir Brusic: Data Warehousing in Molecular Biology. Briefings in Bioinformatics 1(1): 190-198 (2000)
7 Christian Schönbach, Judice L. Y. Koh, Xin Sheng, Limsoon Wong, Vladimir Brusic: FIMM, a database of functional molecular immunology. Nucleic Acids Research 28(1): 222-224 (2000)
1998
6 Vladimir Brusic, George B. Rudy, G. Honeyman, Jürgen Hammer, Leonard C. Harrison: Prediction of MHC class II-binding peptides using an evolutionary algorithm and artificial neural network. Bioinformatics 14(2): 121-130 (1998)
5EEVladimir Brusic, Peter van Endert, John Zeleznikow, Soizic Daniel, Jürgen Hammer, Nikolai Petrovsky: A neural network model approach to the study of human TAP transporter. In Silico Biology 1: 10 (1998)
4 Vladimir Brusic, George B. Rudy, Leonard C. Harrison: MHCPEP, a database of MHC-binding peptides: update 1997. Nucleic Acids Research 26(1): 368-371 (1998)
1997
3 Vladimir Brusic, Christian Schönbach, Masafumi Takiguchi, Victor Ciesielski, Leonard C. Harrison: Application of Genetic Search in Derivation of Matrix Models of Peptide Binding to MHC Molecules. ISMB 1997: 75-83
2 Vladimir Brusic, George B. Rudy, Anthony P. Kyne, Leonard C. Harrison: MHCPEP, a database of MHC-binding peptides: update 1996. Nucleic Acids Research 25(1): 269-271 (1997)
1996
1 Vladimir Brusic, George B. Rudy, Anthony P. Kyne, Leonard C. Harrison: MHCPEP--a database of MHC-binding peptides: update 1995. Nucleic Acids Research 24(1): 242-244 (1996)

Coauthor Index

1Davide Alemani [42]
2Arunmozhiarasi Armugam [19]
3J. Thomas August [20] [21] [22] [23] [27] [28] [39] [40]
4Vladimir B. Bajic [10] [11] [12] [16] [18]
5Kaye E. Basford [41] [42]
6Massimo Bernaschi [42]
7Mikael Bodén [35]
8Ivana Bozic [26]
9Manisha Brahmachary [18]
10Søren Brunak [42]
11Filippo Castiglione [42]
12Siaw Ching Chai [19]
13Allen Chong [11] [12]
14Daniel Churchill [42]
15Victor Ciesielski [3]
16Soizic Daniel [5]
17Patrice Duroux [42]
18Andrew Emerson [42]
19Peter van Endert [5]
20Lin Feng [34]
21Darren R. Flower [9]
22Mark D. Halling-Brown [42]
23Jürgen Hammer [5] [6]
24Hao Han [10]
25Stephanus Daniel Handoko [30]
26Leonard C. Harrison [1] [2] [3] [4] [6]
27Artemis G. Hatzigeorgiou [10]
28A. T. Heiny [28] [39] [40]
29G. Honeyman [6]
30Kandiah Jeyaseelan [19]
31Asif M. Khan [15] [17] [18] [19] [20] [22] [23] [28] [40]
32Judice L. Y. Koh [7] [9] [12] [17] [18] [19] [29]
33Chuay Yeng Koo [19]
34P. Kowalski-Saunders [8]
35S. P. T. Krishnan [18]
36Chee Keong Kwoh [30] [31] [40]
37Anthony P. Kyne [1] [2]
38Paulo Lai [17]
39Kai-Tak Lam [29]
40Kenneth X. Lee [28] [40]
41Marie-Paule Lefranc [42]
42Johann Lenffer [17]
43Jinyan Li [16]
44Hong Huang Lin [37]
45Pierluigi Lollini [42]
46Wafaa El Mejaber [17]
47Olivo Miotto [25] [38] [39] [42]
48David S. Moss [42]
49Santo Motta [42]
50Geok See Ng [31]
51See-Kiong Ng [16]
52Yew-Soon Ong [30]
53Paola Paci [42]
54Arianna Palladini [42]
55Francesco Pappalardo [42]
56Marzio Pennisi [42]
57Nikolai Petrovsky [5] [14]
58Menaka Rajapakse [24] [32] [34]
59Shoba Ranganathan [27] [36]
60Nicolas Rapin [42]
61Ellis L. Reinherz [37]
62Elda Rossi [42]
63George B. Rudy [1] [2] [4] [6]
64Meena Kishore Sakharkar [31]
65Bertil Schmidt [24] [32] [34]
66Christian Schönbach [3] [7] [8] [9] [14]
67Seng Hong Seah [11] [12] [17] [18] [19] [31]
68Xin Sheng [7]
69Adrian J. Shepherd [42]
70Joyce Phui Yee Siew [19]
71Kellathur N. Srinivasan [20] [21] [22] [23] [28] [40]
72Masafumi Takiguchi [3]
73Paul T. J. Tan [15] [17] [19]
74Tin Wee Tan [18] [25] [27] [28] [38] [39]
75Suisheng Tang [10]
76Joo Chuan Tong [27]
77Songsak Tongchusak [37]
78Anitha Veeramani [21]
79Bharadwaj Veeravalli [29]
80Limsoon Wong [7] [9] [16]
81Lonce L. Wyse (Lonce Wyse) [24]
82Liwen You [35]
83John Zeleznikow [5]
84Guanglan Zhang [12] [20] [21] [22] [23] [26] [27] [30] [37] [40]
85Ping Zhang [35] [41] [42]

Copyright © Tue Nov 3 08:52:44 2009 by Michael Ley (ley@uni-trier.de)