Rainer Breitling Vis

*	2009
20	EE	Yang Li, Morris A. Swertz, Gonzalo Vera, Jingyuan Fu, Rainer Breitling, Ritsert C. Jansen: designGG: an R-package and web tool for the optimal design of genetical genomics experiments. BMC Bioinformatics 10: (2009)
19	EE	Simon Rogers, Richard A. Scheltema, Mark A. Girolami, Rainer Breitling: Probabilistic assignment of formulas to mass peaks in metabolomics experiments. Bioinformatics 25(4): 512-518 (2009)
	2008
18	EE	David Gilbert, Rainer Breitling, Monika Heiner, Robin Donaldson: An Introduction to BioModel Engineering, Illustrated for Signal Transduction Pathways. Workshop on Membrane Computing 2008: 13-28
17	EE	Fabien Jourdan, Rainer Breitling, Michael P. Barrett, David Gilbert: MetaNetter: inference and visualization of high-resolution metabolomic networks. Bioinformatics 24(1): 143-145 (2008)
16	EE	Fangxin Hong, Rainer Breitling: A comparison of meta-analysis methods for detecting differentially expressed genes in microarray experiments. Bioinformatics 24(3): 374-382 (2008)
15	EE	Rainer Breitling, David Gilbert, Monika Heiner, Richard J. Orton: A structured approach for the engineering of biochemical network models, illustrated for signalling pathways. Briefings in Bioinformatics 9(5): 404-421 (2008)
	2007
14	EE	Michael Biehl, Rainer Breitling, Yang Li: Analysis of Tiling Microarray Data by Learning Vector Quantization and Relevance Learning. IDEAL 2007: 880-889
13	EE	Ali Al-Shahib, David Gilbert, Rainer Breitling: Discriminating Microbial Species Using Protein Sequence Properties and Machine Learning. IDEAL 2007: 890-897
12	EE	Rudi Alberts, Peter Terpstra, Menno Hardonk, Leonid V. Bystrykh, Gerald de Haan, Rainer Breitling, Jan Peter Nap, Ritsert C. Jansen: A verification protocol for the probe sequences of Affymetrix genome arrays reveals high probe accuracy for studies in mouse, human and rat. BMC Bioinformatics 8: (2007)
11	EE	Evert-Jan Blom, Dinne W. J. Bosman, Sacha A. F. T. van Hijum, Rainer Breitling, Lars Tijsma, Remko Silvis, Jos B. T. M. Roerdink, Oscar P. Kuipers: FIVA: Functional Information Viewer and Analyzer extracting biological knowledge from transcriptome data of prokaryotes. Bioinformatics 23(9): 1161-1163 (2007)
	2006
10	EE	Julie L. Morrison, Rainer Breitling, Desmond J. Higham, David R. Gilbert: A lock-and-key model for protein-protein interactions. Bioinformatics 22(16): 2012-2019 (2006)
9	EE	Fangxin Hong, Rainer Breitling, Connor W. McEntee, Ben S. Wittner, Jennifer L. Nemhauser, Joanne Chory: RankProd: a bioconductor package for detecting differentially expressed genes in meta-analysis. Bioinformatics 22(22): 2825-2827 (2006)
	2005
8	EE	Rainer Breitling, Patrick Armengaud, Anna Amtmann: Vector analysis as a fast and easy method to compare gene expression responses between different experimental backgrounds. BMC Bioinformatics 6: 181 (2005)
7	EE	Julie L. Morrison, Rainer Breitling, Desmond J. Higham, David R. Gilbert: GeneRank: Using search engine technology for the analysis of microarray experiments. BMC Bioinformatics 6: 233 (2005)
6	EE	Simon Rogers, Mark Girolami, Colin Campbell, Rainer Breitling: The Latent Process Decomposition of cDNA Microarray Data Sets. IEEE/ACM Trans. Comput. Biology Bioinform. 2(2): 143-156 (2005)
5	EE	Ali Al-Shahib, Rainer Breitling, David Gilbert: Franksum: new feature selection method for protein function prediction. Int. J. Neural Syst. 15(4): 259-275 (2005)
4	EE	Rainer Breitling, Pawel Herzyk: Rank-based Methods as a Non-parametric Alternative of the T-statistic for the Analysis of Biological Microarray Data. J. Bioinformatics and Computational Biology 3(5): 1171-1190 (2005)
	2004
3	EE	Rainer Breitling, Anna Amtmann, Pawel Herzyk: Graph-based iterative Group Analysis enhances microarray interpretation. BMC Bioinformatics 5: 100 (2004)
2	EE	Rainer Breitling, Anna Amtmann, Pawel Herzyk: Iterative Group Analysis (iGA): A simple tool to enhance sensitivity and facilitate interpretation of microarray experiments. BMC Bioinformatics 5: 34 (2004)
1	EE	Mark Girolami, Rainer Breitling: Biologically valid linear factor models of gene expression. Bioinformatics 20(17): 3021-3033 (2004)

Coauthor Index

1	Ali Al-Shahib	[5] [13]
2	Rudi Alberts	[12]
3	Anna Amtmann	[2] [3] [8]
4	Patrick Armengaud	[8]
5	Michael P. Barrett	[17]
6	Michael Biehl	[14]
7	Evert-Jan Blom	[11]
8	Dinne W. J. Bosman	[11]
9	Leonid V. Bystrykh	[12]
10	Colin Campbell	[6]
11	Joanne Chory	[9]
12	Robin Donaldson	[18]
13	Jingyuan Fu	[20]
14	David Gilbert (David R. Gilbert)	[5] [7] [10] [13] [15] [17] [18]
15	Mark A. Girolami (Mark Girolami)	[1] [6] [19]
16	Gerald de Haan	[12]
17	Menno Hardonk	[12]
18	Monika Heiner	[15] [18]
19	Pawel Herzyk	[2] [3] [4]
20	Desmond J. Higham	[7] [10]
21	Sacha A. F. T. van Hijum	[11]
22	Fangxin Hong	[9] [16]
23	Ritsert C. Jansen	[12] [20]
24	Fabien Jourdan	[17]
25	Oscar P. Kuipers	[11]
26	Yang Li	[14] [20]
27	Connor W. McEntee	[9]
28	Julie L. Morrison	[7] [10]
29	Jan Peter Nap	[12]
30	Jennifer L. Nemhauser	[9]
31	Richard J. Orton	[15]
32	J. B. T. M. Roerdink (Jos B. T. M. Roerdink)	[11]
33	Simon Rogers	[6] [19]
34	Richard A. Scheltema	[19]
35	Remko Silvis	[11]
36	Morris A. Swertz	[20]
37	Peter Terpstra	[12]
38	Lars Tijsma	[11]
39	Gonzalo Vera	[20]
40	Ben S. Wittner	[9]

Colors in the list of coauthors