| * | 2009 |
| 7 | EE | Sandra N. Loevenich,
Erich Brunner,
Nichole L. King,
Eric W. Deutsch,
Stephen E. Stein,
Ruedi Aebersold,
Ernst Hafen:
The Drosophila melanogaster PeptideAtlas facilitates the use of peptide data for improved fly proteomics and genome annotation.
BMC Bioinformatics 10: (2009) |
| 6 | EE | Manfred Claassen,
Ruedi Aebersold,
Joachim M. Buhmann:
Proteome coverage prediction with infinite Markov models.
Bioinformatics 25(12): (2009) |
| 5 | EE | Nils Gehlenborg,
Wei Yan,
Inyoul Y. Lee,
Hyuntae Yoo,
Kay Nieselt,
Daehee Hwang,
Ruedi Aebersold,
Leroy Hood:
Prequips - an extensible software platform for integration, visualization and analysis of LC-MS/MS proteomics data.
Bioinformatics 25(5): 682-683 (2009) |
| 2008 |
| 4 | EE | Mi-Youn Brusniak,
Bernd Bodenmiller,
David Campbell,
Kelly Cooke,
James Eddes,
Andrew Garbutt,
Hollis Lau,
Simon Letarte,
Lukas N. Mueller,
Vagisha Sharma,
Olga Vitek,
Ning Zhang,
Ruedi Aebersold,
Julian D. Watts:
Corra: Computational framework and tools for LC-MS discovery and targeted mass spectrometry-based proteomics.
BMC Bioinformatics 9: (2008) |
| 3 | EE | H. Ramos,
P. Shannon,
Ruedi Aebersold:
The protein information and property explorer: an easy-to-use, rich-client web application for the management and functional analysis of proteomic data.
Bioinformatics 24(18): 2110-2111 (2008) |
| 2 | EE | Daehee Hwang,
Ning Zhang,
Hookeun Lee,
Eugene Yi,
Hui Zhang,
Inyoul Y. Lee,
Leroy Hood,
Ruedi Aebersold:
MS-BID: a Java package for label-free LC-MS-based comparative proteomic analysis.
Bioinformatics 24(22): 2641-2642 (2008) |
| 2006 |
| 1 | EE | Frank Desiere,
Eric W. Deutsch,
Nichole L. King,
Alexey I. Nesvizhskii,
Parag Mallick,
Jimmy Eng,
Sharon Chen,
James Eddes,
Sandra N. Loevenich,
Ruedi Aebersold:
The PeptideAtlas project.
Nucleic Acids Research 34(Database-Issue): 655-658 (2006) |