4. ECCB / 6. JBI 2005:
Madrid,
Spain
(Supplement of Bioinformatics)
ECCB/JBI'05 Proceedings, Fourth European Conference on Computational Biology/Sixth Meeting of the Spanish Bioinformatics Network (Jornadas de BioInformática), Palacio de Congresos, Madrid, Spain, September 28 - October 1, 2005.
2005 BibTeX
- Roderic Guigó, Federico Morán, Alfonso Valencia, Josep F. Abril:
ECCB/JBI 2005.
2
Electronic Edition (link) BibTeX
- ECCB/JBI 2005 Organization.
5
Electronic Edition (link) BibTeX
- Cigdem Demir, S. Humayun Gultekin, Bülent Yener:
Augmented cell-graphs for automated cancer diagnosis.
12
Electronic Edition (link) BibTeX
- David de Juan, Mario Mellado, José Miguel Rodríguez-Frade, Patricia Hernanz-Falcón, Antonio Serrano, Antonio del Sol, Alfonso Valencia, Carlos Martínez-A, Ana María Rojas:
A framework for computational and experimental methods: Identifying dimerization residues in CCR chemokine receptors.
18
Electronic Edition (link) BibTeX
- Gisele L. Pappa, Anthony J. Baines, Alex Alves Freitas:
Predicting post-synaptic activity in proteins with data mining.
25
Electronic Edition (link) BibTeX
- Sònia Casillas, Natalia Petit, Antonio Barbadilla:
DPDB: a database for the storage, representation and analysis of polymorphism in the Drosophila genus.
30
Electronic Edition (link) BibTeX
- Myungeun Lim, Myunggeun Chung, Myungnam Bae, Sunhee Park:
Design of a description language for generating wrapper to collect biological data.
32
Electronic Edition (link) BibTeX
- Ulf Leser:
A query language for biological networks.
39
Electronic Edition (link) BibTeX
- Andreas Prlic, Thomas A. Down, Tim J. P. Hubbard:
Adding Some SPICE to DAS.
41
Electronic Edition (link) BibTeX
- Roland Arnold, Thomas Rattei, Patrick Tischler, Minh-Duc Truong, Volker Stümpflen, Hans-Werner Mewes:
SIMAP - The similarity matrix of proteins.
46
Electronic Edition (link) BibTeX
- Oranit Dror, Ruth Nussinov, Haim J. Wolfson:
ARTS: alignment of RNA tertiary structures.
53
Electronic Edition (link) BibTeX
- Emidio Capriotti, Piero Fariselli, Remo Calabrese, Rita Casadio:
Predicting protein stability changes from sequences using support vector machines.
58
Electronic Edition (link) BibTeX
- Koji Tsuda, Hyunjung Shin, Bernhard Schölkopf:
Fast protein classification with multiple networks.
65
Electronic Edition (link) BibTeX
- Joseph D. Szustakowski, Simon Kasif, Zhiping Weng:
Less is more: towards an optimal universal description of protein folds.
71
Electronic Edition (link) BibTeX
- Alejandro Giorgetti, Domenico Raimondo, Adriana Erica Miele, Anna Tramontano:
Evaluating the usefulness of protein structure models for molecular replacement.
76
Electronic Edition (link) BibTeX
- Kristin Missal, Dominic Rose, Peter F. Stadler:
Non-coding RNAs in Ciona intestinalis.
78
Electronic Edition (link) BibTeX
- Eugene W. Myers:
The fragment assembly string graph.
85
Electronic Edition (link) BibTeX
- Henry C. M. Leung, Francis Y. L. Chin:
Finding exact optimal motifs in matrix representation by partitioning.
92
Electronic Edition (link) BibTeX
- Sungroh Yoon, Giovanni De Micheli:
Prediction of regulatory modules comprising microRNAs and target genes.
100
Electronic Edition (link) BibTeX
- Tho Hoan Pham, José Carlos Clemente, Kenji Satou, Tu Bao Ho:
Computational discovery of transcriptional regulatory rules.
107
Electronic Edition (link) BibTeX
- Sach Mukherjee, Stephen J. Roberts, Mark J. van der Laan:
Data-adaptive test statistics for microarray data.
114
Electronic Edition (link) BibTeX
- Florian Sohler, Ralf Zimmer:
Identifying active transcription factors and kinases from expression data using pathway queries.
122
Electronic Edition (link) BibTeX
- Elisabeth Georgii, Lothar Richter, Ulrich Rückert, Stefan Kramer:
Analyzing microarray data using quantitative association rules.
129
Electronic Edition (link) BibTeX
- C. Vogl, Fatima Sanchez-Cabo, Gernot Stocker, S. Hubbard, Olaf Wolkenhauer, Zlatko Trajanoski:
A fully Bayesian model to cluster gene-expression profiles.
136
Electronic Edition (link) BibTeX
- Walter R. Gilks, Brian D. M. Tom, Alvis Brazma:
Fusing microarray experiments with multivariate regression.
143
Electronic Edition (link) BibTeX
- Toni Gabaldón, Martijn A. Huynen:
Lineage-specific gene loss following mitochondrial endosymbiosis and its potential for function prediction in eukaryotes.
150
Electronic Edition (link) BibTeX
- Itay Mayrose, Nir Friedman, Tal Pupko:
A Gamma mixture model better accounts for among site rate heterogeneity.
158
Electronic Edition (link) BibTeX
- Daniel H. Huson, Tobias H. Klöpper:
Computing recombination networks from binary sequences.
165
Electronic Edition (link) BibTeX
- Dirk Husmeier:
Discriminating between rate heterogeneity and interspecific recombination in DNA sequence alignments with phylogenetic factorial hidden Markov models.
172
Electronic Edition (link) BibTeX
- Mathieu Lajoie, Nadia El-Mabrouk:
Recovering haplotype structure through recombination and gene conversion.
179
Electronic Edition (link) BibTeX
- Tomàs Marquès-Bonet, Oscar Lao, Robert Goertsches, Manuel Comabella, Xavier Montalban, Arcadi Navarro:
Association Cluster Detector: a tool for heuristic detection of significance clusters in whole-genome scans.
181
Electronic Edition (link) BibTeX
- Yiping Zhan, David Kulp:
Model-P: a basecalling method for resequencing microarrays of diploid samples.
189
Electronic Edition (link) BibTeX
- E. Simão, Elisabeth Remy, Denis Thieffry, Claudine Chaouiya:
Qualitative modelling of regulated metabolic pathways: application to the tryptophan biosynthesis in E.Coli.
196
Electronic Edition (link) BibTeX
- Dmitriy Leyfer, Zhiping Weng:
Genome-wide decoding of hierarchical modular structure of transcriptional regulation by cis-element and expression clustering.
203
Electronic Edition (link) BibTeX
- Jean-Marc Schwartz, Minoru Kanehisa:
A quadratic programming approach for decomposing steady-state metabolic flux distributions onto elementary modes.
205
Electronic Edition (link) BibTeX
- Naoki Nariai, Yoshinori Tamada, Seiya Imoto, Satoru Miyano:
Estimating gene regulatory networks and protein-protein interactions of Saccharomyces cerevisiae from multiple genome-wide data.
212
Electronic Edition (link) BibTeX
- Nam Tran, Chitta Baral, Vinay J. Nagaraj, Lokesh Joshi:
Knowledge-based framework for hypothesis formation in biochemical networks.
219
Electronic Edition (link) BibTeX
- Mario Albrecht, Carola Huthmacher, Silvio C. E. Tosatto, Thomas Lengauer:
Decomposing protein networks into domain-domain interactions.
221
Electronic Edition (link) BibTeX
- Csaba Pál, Balázs Papp, Martin J. Lercher:
Horizontal gene transfer depends on gene content of the host.
223
Electronic Edition (link) BibTeX
- José M. Peña, Johan Björkegren, Jesper Tegnér:
Growing Bayesian network models of gene networks from seed genes.
229
Electronic Edition (link) BibTeX
- Olga Vitek, Chris Bailey-Kellogg, Bruce Craig, Paul Kuliniewicz, Jan Vitek:
Reconsidering complete search algorithms for protein backbone NMR assignment.
236
Electronic Edition (link) BibTeX
- Kengo Sato, Yasubumi Sakakibara:
RNA secondary structural alignment with conditional random fields.
242
Electronic Edition (link) BibTeX
- Sjors H. W. Scheres, Mikel Valle, José María Carazo:
Fast maximum-likelihood refinement of electron microscopy images.
244
Electronic Edition (link) BibTeX
- Shanfeng Zhu, Yasushi Okuno, Gozoh Tsujimoto, Hiroshi Mamitsuka:
A probabilistic model for mining implicit 'chemical compound-gene' relations from literature.
251
Electronic Edition (link) BibTeX
- Robert Hoffmann, Alfonso Valencia:
Implementing the iHOP concept for navigation of biomedical literature.
258
Electronic Edition (link) BibTeX
- Robert Küffner, Katrin Fundel, Ralf Zimmer:
Expert knowledge without the expert: integrated analysis of gene expression and literature to derive active functional contexts.
267
Electronic Edition (link) BibTeX
- Martin Szugat, Daniel Güttler, Katrin Fundel, Florian Sohler, Ralf Zimmer:
Web servicing the biological office.
269
Electronic Edition (link) BibTeX
Copyright © Wed Jun 4 18:32:45 2008
by Michael Ley (ley@uni-trier.de)
